Tetragenococcus halophilus YJ1: GLW17_10395
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Entry
GLW17_10395 CDS
T06306
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey03030
DNA replication
tey03430
Mismatch repair
tey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLW17_10395 (dnaE)
03430 Mismatch repair
GLW17_10395 (dnaE)
03440 Homologous recombination
GLW17_10395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tey03032
]
GLW17_10395 (dnaE)
03400 DNA repair and recombination proteins [BR:
tey03400
]
GLW17_10395 (dnaE)
Enzymes [BR:
tey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLW17_10395 (dnaE)
DNA replication proteins [BR:
tey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GLW17_10395 (dnaE)
DNA repair and recombination proteins [BR:
tey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GLW17_10395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
SSB
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QGP77173
UniProt:
A0AB37D6H5
LinkDB
All DBs
Position
2175346..2178672
Genome browser
AA seq
1108 aa
AA seq
DB search
MKLSASHLTALSSYSLLQSTIKIPQYVQLAKKMGYKYLGITDRNNLYGALAFVKACQREQ
IHPVIGLLLEYYSQQTQKEHEIFLFAKNNQGYKKLMHLSSQKMSGTQVLLEGSSLTDLFA
ILPVENELTELRFEDEKIAKNRVSALQATIGKDQLFYGVAYQEALADEMNEWMQQQGVQA
AAYQLIDSLYPEEAFSVKVMHHIKEGEQIENLQQEMQGVTAFKSLEAAEKKAAWYETNAP
QALQNTEMIAKNCQAQIPLHQKLLPHYPIKDHKSASQYLKELCETKLPQRVAKVDARYQE
RLDYELSVIHRMGFDDYFLIVWDVMDFLHENKIVTGAGRGSAAGSLTAYVLSITDVDPIK
YDLLFERFLNPERNTMPDIDLDIPDNKRGEVLQYVRQKYGQNHAAQIATFGTMAAKMVLR
DICRVFGLSQSEANRWSNAIPKQMKITLEEAYVQSKALRELANMNERNKQLFQAAKTLEG
LPRHVSTHAAGVVISDQDLLDLVPLQEGSEGIWLTQFTMNDVEETGLLKIDFLGLRNLSI
IADALQSIQKMTKQNISQKDIPLDDKKTLRLFQKGDTTGVFQFESAGIRNVLRRLIPETI
EDVAAVNALYRPGPMQNIDTFIKRKHGQEKIDYLDSSLAPILENTYGVIVYQEQIMQIAS
QMAGFTLGQADILRRAISKKKKSVLDKQRRYFIEGAQNKGFSKEKANQIYDYIERFADYG
FNRSHAFAYSFVAFQMAYLKVHYPAPFYKALLRSVLHTPKKLKEYLSDAKNAGVKVLNPS
INQSAYSFYLNSLQEIRFGLGSIKGIRRDFIYDILAERRENGNYASLNQFLTRMNQYNSK
WLKEENIRPLIAIGAFDELEENRRQAISQLEGKIQNVVYSGGSLDLLDMMALKNEALTDF
SLEEKLNLEEQYLGIYLSGHPVEQFEKIKQRKKVIDISEFVENTIVNLLIYGTEVREIRT
KKGEQMAFLEGNDPTDETSVTIFPRLYRKVRNQLVENQVYYIEGKVEKNKYNDQLQVIAN
QVVAAKTLADTIADKTAYLKIPAAADQKQLVASLYAVIKQFRGNVPVIIYYEKTGETRLL
PEKNWVTYTKDLQNSLEEIIGSGNVVFK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgagcgcttcacatttaacagcattgtcatcttactctttattacaaagtacg
atcaaaattccccaatatgttcaattagcgaaaaaaatgggctataagtatctaggaatt
acagataggaataatctttatggtgctttagcctttgtaaaggcttgtcaaagggaacaa
atacatccggtgatcggattgttacttgaatattactcccaacaaactcaaaaagagcat
gaaatctttttatttgcaaaaaataaccaaggatacaaaaagcttatgcacttatcaagc
caaaaaatgagcgggacacaagttttattagaaggatcttccttaaccgacttattcgct
attttacctgttgaaaatgaattaactgaattacgttttgaagacgaaaaaatagctaaa
aatagagtgtctgcgttgcaagcaaccattggaaaagatcagctcttttatggtgttgct
tatcaagaagctttagcagatgaaatgaatgaatggatgcaacagcaaggagtacaagcg
gctgcttatcaattgatagattcactttatccagaggaagctttttcagtaaaagtcatg
catcatattaaagaaggggaacaaatagaaaatctccaacaagagatgcaaggagttact
gcttttaaaagtttagaagcagccgaaaaaaaagcagcttggtatgaaacaaacgcacct
caagctttgcaaaacactgaaatgattgcaaaaaactgtcaggcacaaattcctttacac
caaaaattattgccccattatcctataaaagatcataaaagtgctagtcagtatttaaaa
gagctgtgtgaaacaaaacttcctcaacgtgttgcaaaagttgatgcacgttatcaagaa
cgcttggattatgagctttcagttatccacagaatgggttttgatgattattttctgatt
gtttgggatgttatggactttttacatgaaaataaaattgtaactggcgcaggacgcggc
tcagcagctggttctttaactgcttatgtcttgtccattacagatgtggatccaattaag
tatgatttattgttcgaacgttttctaaatcctgaacgtaatacaatgccagatattgac
ttagatatacctgataataaaagaggagaggttttacaatatgtaaggcaaaagtacgga
caaaaccatgctgcgcaaattgctacttttggcacaatggctgctaagatggttttacgt
gatatttgtagagtctttggtctatctcaaagcgaagcaaatcgttggtctaatgccatt
cctaagcaaatgaaaattactctagaagaggcctatgttcagtcaaaagcactgcgagaa
ttagccaatatgaatgaacggaataaacagttatttcaagcagctaagacactggaagga
ctaccgcgtcatgtctcaactcatgcggcaggggtagtgatcagtgatcaagacttatta
gatttagttcccttacaagaaggctctgaaggtatttggttaacccaatttactatgaat
gatgtagaagaaactggactgttaaaaattgactttttaggcttacgtaatttatcgatc
attgctgacgccttgcaaagtattcaaaaaatgactaaacagaatattagtcaaaaagac
attcctttagatgataaaaaaacgttacgcttgtttcaaaaaggagatactacaggggtg
tttcaatttgagtccgcaggtattcgcaatgttttacggcgtttgattcctgaaacaatc
gaagatgtcgcagcagtgaacgcattatatcggccaggtccaatgcaaaatattgatacc
tttattaaaagaaaacatggacaagaaaaaatcgattacctagattcaagtctagcgcct
atattagaaaatacttacggtgttatcgtttatcaggaacaaattatgcaaattgcttcg
caaatggctgggtttactttaggtcaggctgatattttgcggcgagcgatcagtaaaaag
aaaaaaagtgttttagataagcagcgccgctattttattgaaggcgcacaaaataaggga
tttagcaaagagaaagcgaatcaaatttatgactatattgaacgttttgcggattatggt
tttaatcgttcgcatgcttttgcctattcttttgtcgcttttcaaatggcttatttgaaa
gttcattacccggcgcctttttataaagccttgctacgttcagtcttgcatacgcctaag
aagttaaaagaatatcttagcgacgctaaaaatgctggtgtcaaagttttaaatccttcg
atcaatcaaagtgcgtattccttttatttgaactctttacaagaaattcgttttggttta
ggaagtattaaaggcattcgtcgtgattttatttatgacattcttgcagaaagaagagaa
aacggaaattacgcctcgttaaatcagtttctaactcggatgaatcaatataatagtaag
tggttgaaagaagaaaatatccgtcctttaatagctataggagcatttgatgagttagaa
gaaaatcgccgacaagcaatttctcaattagaaggtaaaatccaaaatgtagtatacagt
ggaggtagccttgatttattagatatgatggctttaaaaaatgaagcacttactgatttc
agtctggaggaaaaattaaatttagaagaacagtatttaggaatttatctatctggacat
cctgtagaacaatttgagaaaatcaaacaaagaaaaaaagtaatcgatatttctgaattt
gtcgaaaataccattgtcaatttgttgatctatggtactgaagttagagaaattcgaaca
aaaaaaggtgaacaaatggcctttctagaaggaaacgacccaacggatgaaacttctgta
acgatctttccgcgcttgtatcgtaaagttaggaatcagctggtagaaaatcaggtctat
tatattgaaggtaaagtggaaaaaaataaatataacgatcaacttcaagtaattgctaat
caagtggttgcagctaaaacattagctgatacgattgctgataaaacagcttatttgaag
ataccggcagcagcggatcaaaaacaacttgtcgctagcttgtatgctgtgattaaacaa
tttaggggcaatgtccctgtcatcatttactacgaaaaaaccggagaaactcgcttatta
ccggaaaaaaattgggtgacttatacaaaagatttgcagaattctttagaagagattata
ggctcaggaaatgttgtatttaaataa
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integrated database retrieval system
