Tetragenococcus halophilus YJ1: GLW17_10715
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Entry
GLW17_10715 CDS
T06306
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tey
Tetragenococcus halophilus YJ1
Pathway
tey02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tey00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GLW17_10715 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tey03021
]
GLW17_10715 (rpoD)
Transcription machinery [BR:
tey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GLW17_10715 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QGP77219
UniProt:
A0A3G5FLG4
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All DBs
Position
2237261..2238367
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AA seq
368 aa
AA seq
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MAEETKVKYETAVKDFIKQNKTKGQVVYDELSNALATPYSLGAEGMDKLIQQVEDAGISV
VDENGEPSLRSLKTTEKVEKEKPRDDLSAPTGVKINDPVRMYLKEIGRVSLLTAEEEVDL
ALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG
AEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGIDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaacaaaagttaaatacgaaacagcggttaaggattttattaagcaaaac
aaaacaaagggacaagtcgtttatgatgaattatctaatgctttagctactccctattca
ttgggcgctgaaggtatggataaactgattcaacaagtagaagatgcaggaatcagtgtg
gtagacgaaaacggtgaaccttcattacgaagcttaaaaactactgaaaaagtggaaaaa
gaaaaacctagagatgatctatcagctcctacaggtgtaaaaattaatgaccctgttcgt
atgtacttgaaagaaattggtcgtgtttcattattaacagctgaagaagaagttgatcta
gccttaaaaatcgaagagggcgatcaagaagcaaaacaacgcttagcagaagccaacctt
cgtttagttgttagtattgcaaaacgttatgtaggacgtggcatgcaatttcttgatttg
atacaagaaggtaacatgggcctgatgaaggctgtagaaaaatttgattatcgtaaggga
tttaaattttcaacctatgcgacttggtggattcgtcaagcgattacacgggcaatcgcc
gatcaagcaagaactattcgtattccagttcatatggtagaaacaatcaataaattgatc
cgtattcaacgtcaattattacaagacttaggtcgtgaaccaacaccagaagaaattggc
gcggaaatggacttgccaacggaaaaagttcgagaaatactaaaaattgcgcaagaacca
gtttccttggaaacacccattggtgaagaagatgattctcacttgggagatttcatcgaa
gaccaagaagcgacaagtccttctgatcatgcggcatatgagttgttaaaagaacagttg
gaagacgttttggacacgctaaccgaccgagaagaaaatgttttgcgcttgcgttttggt
attgatgatgggcgtacacgtacattagaagaagtaggcagagtatttggcgtgacacgc
gaaagaattcgtcaaatcgaagcaaaagctttacgtaaattacgtcatccatctcgttca
aaacagttgaaagattttctagaataa
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