Tessaracoccus sp. T2.5-30: BKM78_00370
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Entry
BKM78_00370 CDS
T04747
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tez
Tessaracoccus sp. T2.5-30
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tez03016
]
BKM78_00370
Enzymes [BR:
tez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BKM78_00370
Transfer RNA biogenesis [BR:
tez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BKM78_00370
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Paralog
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Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AQX14562
LinkDB
All DBs
Position
complement(78947..80233)
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AA seq
428 aa
AA seq
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MGGPHGARRGPAAPPPWRLIPSHRAARMTYIESPREPLRPVVEDPSALESCLEALASATG
PVAFDTERAHGHRYWPKAYLLQIRREGAGTWLVDPVAFERGGPADLSSLVTACGDAPWII
HAASQDLPCMREISVLPPSIIDTELAARLLGKPGASLGALLAAELGVHLRKAHSADNWSK
RPLPPSWLTYAALDVDYLLELAERLQDELQEVGRAEWADQEFADTLARHTAPPQPRVDPW
RRLSGITTLRTPRQYAVARALWTARDAIAQRRDRPPGWILPDAAILEAASLARDSVPTKS
ELLRIKGFAAPPGSRNLSTWLAALDEVRALPASGYPPPRLRSDGVPHPRTWDRVNPEAAE
RWAKVRPVIDELACDLGGLQPSLVAPPVAVQGSLFASADVTHEDLLALGARPWQADFLVP
LIREALGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgggaggacctcatggggcacgtcgcgggccagccgcccctcccccctggcgtctcatc
ccttcccaccgggcggcacggatgacctacatcgaaagccccagagaaccgctgcgtccc
gtcgtcgaggacccgagcgccctcgagtcctgcctcgaggccctcgcgtcggccacagga
cctgtcgccttcgacaccgagcgggcacacggccaccggtactggcccaaggcgtacctg
ctgcagatccgccgcgagggcgccggcacgtggctcgtcgatcccgtggcgttcgaacgc
ggcggacccgccgacctgtcgtctctcgtcactgcctgcggggacgcgccgtggatcatc
cacgcggccagccaggatcttccctgcatgcgtgagatcagtgtcctgccgccctcgatc
atcgataccgagctcgcggcccgcctgctcggaaagcccggcgccagcctcggagccctg
ctggcggccgaactgggcgtccacctccgcaaggcccactcggcggacaactggtcgaag
cggccgctgccgccgtcgtggctcacgtatgccgcgctcgacgtcgactacctcctcgag
ctggctgagcggctgcaggatgagctgcaggaggtcgggcgcgccgagtgggccgaccag
gagttcgcggacacgttggcgcgccacaccgctcccccgcagccccgcgtggatccgtgg
cgccgcctcagcgggatcaccacgctgcgcacgccacggcagtacgccgtcgcccgggcc
ctgtggaccgcgcgcgacgccatcgcccaacggcgcgatcgaccgcccggctggatcctc
ccggacgccgccatcctggaggcggccagcctggcgcgtgactcggttcccacgaagtcg
gagctcctgcggatcaagggcttcgccgccccgcccggcagccgaaacctgtccacctgg
ctcgccgccctcgacgaggtgcgggcgctaccggcgtccgggtatcccccaccgcgtctg
cgctcggacggcgtgccgcacccacggacatgggaccgggtgaaccccgaggccgctgag
cgatgggcaaaggtgcgtcccgtgatcgacgagctcgcctgcgatctcggcggcctgcag
cccagcctcgtcgctcccccggtggcggtgcagggcagcctgttcgcatccgcggacgtc
acgcacgaggacctgctggccctgggcgcacgtccgtggcaggccgacttcctcgtcccc
ctgatccgtgaggccctgggccgttag
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