Tessaracoccus sp. T2.5-30: BKM78_01900
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Entry
BKM78_01900 CDS
T04747
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tez
Tessaracoccus sp. T2.5-30
Pathway
tez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM78_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tez03019
]
BKM78_01900
Messenger RNA biogenesis [BR:
tez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKM78_01900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
HDOD
IFT57
Motif
Other DBs
NCBI-ProteinID:
AQX17086
UniProt:
A0A807N876
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Position
complement(405661..407250)
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AA seq
529 aa
AA seq
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MVAGVVVVAAAVLAWLLWRATVRNRLERDSWERRSRADMASIRESAQAAAETIRADAERL
LAQAQERAREALDDVERRRGEMEASLTAQRAELREVRATQERRESRLHEREDRVSAEAEG
LESRAQRLEAQRTQLKEQREALRLERDQVHAELERVAGLTVAEAKAEVLAEAERQAKLTA
TALARDIEGAAKREADKLARSIIVTAIQRVASEQTSESVVSTVDLPSDDMKGRIIGREGR
NIRAFEQITGVNVLIDDTPESVLLSSFDPVRREIARLTLTDLVADGRIHPARIEEVYERA
ERRIHERIEREAEDALTEVGIVDLHPDLVPILGSLAYRTSYGQNVLRHLVECAHLAGVMA
AELGLDVATCKRAAFLHDIGKALTHEVEGPHALIGAELLRKHGEHEDIVHAVEAHHNEVE
PRTVEAVLTQAADAISGSRPGARRESLEAYVERMENLEGIALAHEGVLRAYAMQAGREVR
IMVAPDQVDDAGAHALARDIAAEVERNLSYPGQIRITVVRESRATETAH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atcgtcgcaggcgtggtcgtggtcgccgccgccgttctggcgtggctgctgtggcgggcc
accgtccgcaaccggctcgagcgggactcgtgggaacgccggtcccgcgcggacatggcc
tcgatccgcgagtcggcccaggcggccgcggagaccatccgcgccgacgccgagcggctg
ctcgcccaggcgcaggagcgggcccgcgaggccctcgacgacgtggagcggcggcgcggc
gagatggaggcctccctcaccgcccagcgcgccgagctgcgcgaggtccgggccacgcag
gagcggcgcgagtcgcgtctgcatgagcgcgaggaccgggtgtcggctgaggccgagggc
ctggagtccagggcgcagcggctcgaggcccagcgcacgcagttgaaggagcagcgcgag
gccctgcgcctcgagcgcgaccaggtgcacgcggaactcgagcgcgtggccgggctcacc
gtcgccgaggcgaaggccgaggtgctcgccgaggcggagcggcaggccaagctgacggcc
accgccctggcccgcgacatcgagggcgcggcgaagcgggaggccgacaagctggcccgc
tccatcatcgtcacggccatccagcgcgtcgcctccgaacagaccagcgagtccgtcgtc
tccaccgtcgatctccccagcgacgacatgaagggccgcatcatcggccgcgagggccgc
aacatccgcgccttcgagcagatcaccggcgtcaacgtgctcatcgacgacacccccgag
tcggtgctgctcagcagcttcgacccggtccgccgcgagatcgcccgcctcacgctcacc
gacctcgtcgccgacgggcggatccaccccgcccgcatcgaggaggtctacgagcgggcc
gagcggcgcatccacgagcggatcgaacgcgaggccgaggacgcgctcaccgaggtgggc
atcgtcgacctccatcccgacctcgtgcccatcctggggtcgctggcctaccggacgtcc
tacggccagaacgtgctgcggcacctggtcgagtgcgcgcacctggccggggtcatggcc
gccgaactcggcctcgacgtcgctacgtgcaagcgggccgccttcctgcacgacatcggc
aaggcgctcacccacgaggtcgaggggccgcacgcgctcatcggagccgaactgctgcgc
aagcacggcgagcatgaagacatcgtccacgccgtcgaggcccaccacaacgaggtcgag
ccccgcaccgtcgaggccgtcctcacccaggcggccgacgccatctccgggtcacggccg
ggagcccgtcgggagtcgctcgaggcgtacgtcgagcgcatggagaacctggagggcatc
gccctggcccacgagggcgtgctgcgggcctacgccatgcaggccggccgcgaggtgcgg
atcatggtggcgcccgaccaggtcgacgacgccggcgcgcacgcgctggcccgcgacatc
gccgcggaggtcgagcgcaacctcagctaccccgggcagatccggatcaccgtggtgcgc
gagtcgcgcgccacggagaccgcccactga
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