Tessaracoccus sp. T2.5-30: BKM78_03305
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Entry
BKM78_03305 CDS
T04747
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tez
Tessaracoccus sp. T2.5-30
Pathway
tez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM78_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tez03019
]
BKM78_03305
03009 Ribosome biogenesis [BR:
tez03009
]
BKM78_03305
Enzymes [BR:
tez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BKM78_03305
Messenger RNA biogenesis [BR:
tez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKM78_03305
Ribosome biogenesis [BR:
tez03009
]
Prokaryotic type
rRNA processing factors
BKM78_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AQX15065
UniProt:
A0A807N2R2
LinkDB
All DBs
Position
complement(687497..690238)
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AA seq
913 aa
AA seq
DB search
MLEMSDGTVSPQEQVPATTAPPRRRRAASRPAGPPATPAPSDPTPAAPAAAEPAQAAAPE
ASPAAEPVTAPAAEPVAAEAPAPQEDAAPPTRRRRAATKAAGEPAAPRRRRVKAVEHDGA
SAVEATPESAPEPGQPEEIAPTTAAPAAEAPAAEAPAPTRRRATRRTAPPAEADRPAASQ
EAPASDAAPAEAAPPADADPAAAADRALHQLQDATPAPVVDEAVTTPAPSRRRRATRPTA
PPQAPAETDEDPIAAALRAAEEVAEARRAVLSDPFLTASARDQQLADLAGAIAAGPEDEV
VAEEEQTEDLAGIADQPEAADDVADADDDIDEDVASDEEDVDAEGGETRRRRRRRGGRRR
RRVGSRDESDETGAESDETGAESDADESPESEGAEGESESETETDESGSTRRRRRRRRRG
DAGDASSIDDEVTGIEGSTRMEAKRQRRKESRAAGRRRAPILSEAEFLARRESVDRRLVI
RQAEDYTQLAVVEDNILVEHYVDKASATSLIGNIYIGRVQNVLPSMEAAFIDIGRGRNAV
LYAGEVDWALFGVTGENRKVENVLKSGQSVLVQVTKDPVGAKGARLTGHISLPGRYIVYS
PGGHLSGISRKLPDTERARLRGILATLISDEESVIVRTAAEGVSEEELVRDVNRLKAQWE
VIEKKSKQGSAPQALYSEPDLTLRIVRDLFTEDFAQLVVQGNGGPEDAYDAISAYVGHVA
PHLADRVSRFQADGDDSDVFAQFKIDEQIAKALDRKVYLPSGGSLVIDRTEAMTVIDVNT
GRFTGSGGNLEATVTSNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLPSNRDLLLRRLVE
CLGRDRTRHQVAEVTSLGLVQLTRKRIGTGLQEAFTEQCEHCHGAGYVRFEEPVDSQSPS
DGGERKPRRRGKK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagatgtccgacggtaccgtcagcccgcaggaacaggtccccgccaccaccgcg
ccgccgcgccgtcgccgcgccgcctcccgcccggccgggccgcccgcaacccccgccccc
tcagatcccactcccgcggcgcctgccgcggccgagcccgcccaggccgccgcgcctgag
gcgtcgcccgccgccgagccggtcaccgcgcccgccgccgagccggtcgccgccgaggcc
cccgcgccccaggaggacgccgcaccgcccacccgacgccgccgggctgccaccaaggcc
gccggcgaacccgcggccccgcgccgccgccgggtcaaggcggtcgagcacgacggtgcg
agcgccgtcgaggccacccccgagtccgcgccggagcccggccagcctgaggagatcgcc
ccgaccactgcggcccccgccgcagaggcccccgcagcagaggcccccgcgcccacccgc
cggcgcgcgacgcgccgcaccgcacctccggcagaggcggaccgccccgcggcctcgcag
gaggcccccgcatccgacgccgcgcccgccgaggccgcgccccccgccgacgcggacccg
gccgccgccgccgaccgcgccctgcatcagctgcaggacgcgacgcccgcgcccgtcgtc
gacgaggccgtcacgacgcccgcgccgtcgcgccgccgccgcgccacccgccccacggcg
ccgccgcaggcgcccgcggagaccgacgaggacccgatcgcagcggccctgcgcgcggcc
gaagaggtcgcagaagcgcggcgggccgtgctgagcgatccgttcctcaccgcctcggca
cgcgaccagcagctcgccgatctggccggagccatcgcggccggcccggaggacgaggtg
gtcgccgaggaggagcagaccgaggacctggccggcatcgccgatcagccagaagccgct
gacgatgtcgcggacgccgacgacgacatcgacgaggacgtggcctccgacgaggaggac
gtggacgccgagggtggcgagacccgtcgccgtcgccgtcgccgcggcggtcgccgtcgc
cgccgcgtcggctcgcgcgacgagtccgacgagacgggcgccgagtccgacgagacgggc
gccgagtccgacgccgacgagagccccgagtcggagggcgccgaaggcgagtccgagtcc
gagaccgagaccgacgagtccggcagcacccgccgtcgccgccgccgtcgccgccgcggt
gacgcgggcgacgcgtcgtccatcgacgacgaggtcaccggcatcgagggttccacccgc
atggaggccaagcggcagcgccgcaaggagtcccgcgccgccgggcgccgccgcgcgccg
atcctcagcgaggccgagttcctcgcccgccgcgagtcggtcgaccgtcgcctggtcatc
cggcaggcggaggactacacgcagctggccgtcgtcgaggacaacatcctcgtcgagcac
tacgtcgacaaggcctccgccacgtcactgatcggcaacatctacatcggccgcgtccag
aacgtcctgccgagcatggaggccgcgttcatcgacatcggccgcggccgcaacgccgtc
ctgtacgccggcgaggtggactgggcgctgttcggggtgaccggcgagaaccgcaaggtc
gagaacgtgctcaagtccggtcagagcgtcctggtgcaggtgaccaaggacccggtcggg
gccaagggcgcccgcctcaccgggcacatctcgctgcccggccgctacatcgtctactcg
ccgggcggccacctctccggcatctcccgcaagctccccgacacggagcgtgcccggctg
cgcggcatcctcgccacgctcatctccgacgaggagtccgtcatcgtgcggaccgcggcg
gagggcgtgagcgaagaggaactggtgcgcgacgtcaaccggctcaaggcccagtgggag
gtcatcgagaagaagtcgaagcagggcagcgccccgcaggcgctctacagtgagccggac
ctgacgctgcgcatcgtccgcgacctcttcaccgaggatttcgcccagctcgtcgtgcag
ggcaacggtggcccggaggacgcctacgacgcgatctcggcctacgtcggccacgtcgcc
ccgcacctggccgaccgcgtgtcccggttccaggctgacggcgacgactccgacgtgttc
gcgcagttcaagatcgacgagcagatcgccaaggcgctggaccggaaggtctacctgccc
tcgggcggatcgctggtgatcgaccgcaccgaggccatgacggtcatcgacgtcaacacc
gggcggttcacgggttccgggggcaacctcgaggcgaccgtgaccagcaacaacctcgaa
gcggcggaggagatcgtccggcagctgcgtctgcgcgacctgggcggcatcatcgtgatc
gacttcatcgacatggtcctgcccagcaaccgcgacctgctgctgcggcgactcgtcgag
tgcctcggccgggaccgcacccgccaccaggtcgccgaggtgaccagcctcgggctcgtc
cagctgacgcgcaagcggatcggcacgggccttcaggaggcgttcaccgaacagtgcgag
cactgccacggcgcgggctacgtccgcttcgaggagccggtggactcgcagtccccgtcc
gacggcggggagcgcaagccccgccgcaggggcaagaagtag
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