Tessaracoccus sp. T2.5-30: BKM78_05780
Help
Entry
BKM78_05780 CDS
T04747
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tez
Tessaracoccus sp. T2.5-30
Pathway
tez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM78_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tez03019
]
BKM78_05780
03400 DNA repair and recombination proteins [BR:
tez03400
]
BKM78_05780
Enzymes [BR:
tez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKM78_05780
Messenger RNA biogenesis [BR:
tez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BKM78_05780
DNA repair and recombination proteins [BR:
tez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BKM78_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HTH_IclR
RecQ_Zn_bind
AAA_30
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AQX15486
LinkDB
All DBs
Position
1220219..1222366
Genome browser
AA seq
715 aa
AA seq
DB search
MAHRGSAGLRDEALDALRSLTGRPDAEFHDGQFEAIEALVDGHRRALVVQRTGWGKSAVY
FISALLQRRAGAGPALIVSPLLALMRDQVAAAERAGVRAVAINSANVTEWSDIEQLLDAD
AVDVLLVSPERLVNPRFREQQLPRLIAAMGLLVIDEAHCISDWGHDFRPDYRRIRTLIAE
LPDEIPVLATTATANERVVADVVEQMGIGGHEVFTLRGPLARTSLRLGVLDLGTAWRRLA
WLSEHLSELPGSGIVYCLTVAAAEDTAAHLAKAGHSVLPYTGRTDAAERLEAETALKENR
VKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATDNADVLLLPGPEDRD
IWHFFATNAMPTQARADAVLGALAHEGAPLSVAALESRVDLRRGQLELLLKVLAVEGAVE
YVQGGWVATRAEWIYDAERYGRIAAARRAEQDAMLGYEAGRECRMAFLTAGLDDPHAAPC
GRCDVCAGVWFPTGISADDEAAAKAGVDRVGVELAPRALWPGGLDRLGVTDGGKKLSGKI
APDQRLEPGRVVARLTDLGWGGTLRDLFAPDRDGRPVDAEVPEGLAQASLRVLREWDWTQ
RPTSVAWVPSISRPRLVESLATGIATAGRLRLLGPLELSPTATPLDRSTNSAFRVRDVWN
RFRVRPAMAEALAAQTGPVLLVDDLVESRWTLTVAGRLLRRAGAPAVLPFALGTY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtggcccatcgcgggtccgccggactgcgggacgaggccctggacgcgctgcgcagcctc
accggccggcccgacgccgagttccacgacggccagttcgaggcgatcgaggccctcgtc
gacgggcaccggcgtgcgctcgtggtgcagcgcaccggctgggggaagtcggcggtgtac
ttcatctcggcgctgctgcagcgccgcgcgggcgccgggccggcgctcatcgtgtcaccg
ctgctggcgctcatgcgcgaccaggtggcggccgccgagcgggccggggtgcgggcggtg
gcgatcaactcggccaacgtcacggagtggtccgacatcgagcagctcctggacgccgac
gccgtcgacgtgctcctcgtgtcgcccgagcgcctcgtcaacccgcggttccgggagcag
cagctaccgcggctgatcgcggcgatggggctcctggtgatcgacgaggcccactgcatc
agcgactggggccacgacttccgccccgactaccgccgcatccgcaccctcatcgcggaa
ctacccgacgagatccccgtgctcgcaaccacggccacggccaacgagcgggtcgtcgcc
gacgtcgtcgagcagatgggcatcggcggtcacgaggtgttcacgctgcgcggtcctctc
gcccggacgtcgctgcgcctgggcgtcctggacctcggcaccgcctggcgccgccttgcg
tggctgagcgagcacctgtccgagcttcccggcagcggcatcgtctactgcctgaccgtc
gctgccgcggaggacaccgccgcgcacctggccaaggcggggcactcggtgctcccctac
acgggccgcaccgacgccgcggagcggctggaggccgagacggcgctgaaggagaaccgc
gtcaaggcgctggtggcgacgtctgcgctgggcatgggcttcgacaagccggacctcggc
ttcgtcgtccacctcggcgccccgagctcgccggtggcgtactaccagcaggtgggccgc
gccggccgcgccaccgacaacgccgacgtgctgctgctcccgggcccggaggaccgcgac
atctggcacttcttcgccaccaacgcgatgccgacgcaggcccgcgccgacgcggtgctg
ggcgcactggcccacgagggggccccgctgtcggtggcggcgctggagtcgcgggtggac
ctgcggcgcgggcagctggagttgctgctgaaggtgctggccgtcgagggcgccgtcgag
tacgtgcagggcgggtgggtcgccacccgcgcggagtggatctacgacgccgagcgctat
ggccgcatcgccgccgcccgccgcgcggagcaggacgcgatgctcggctacgaggcgggc
agggagtgccggatggcattcctcaccgccgggctcgacgatccgcacgcggcgccgtgc
ggccgctgcgacgtgtgcgccggggtctggttccccaccggcatcagcgccgacgacgag
gccgcggccaaggcgggcgtcgaccgggtcggcgtcgagctcgccccgcgggcgctgtgg
cccggcggcctggaccggctcggcgtcaccgacggcggcaagaagctcagcgggaagatc
gccccggatcagcggctggagccgggccgggtggtcgcccggctcaccgacctcggctgg
ggcggcacgctccgcgacctgttcgccccagaccgtgacggccgacccgtcgacgccgag
gtgcccgagggcctggcccaggcgtcgctcagggtgctgcgcgagtgggactggacgcag
cggcccacctccgtcgcctgggtgccgagcatcagccggccccggctggtggagtcgctg
gccacgggcatcgcgacagcgggacggttgcggctgctcggcccgctggagctgagcccc
accgcgactccgttggaccggtcgaccaacagcgcgttccgggtgcgcgacgtgtggaac
aggttccgggtgcggcccgcgatggccgaggccctggccgcccagaccgggccggtgctg
ctcgtcgatgacctcgtcgagtctcgctggacactcaccgtcgccggccgcctcctccgc
cgcgccggcgcccccgcggtgctgccgttcgcgttggggacgtactga
DBGET
integrated database retrieval system
