Tessaracoccus sp. T2.5-30: BKM78_12770
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Entry
BKM78_12770 CDS
T04747
Name
(GenBank) endonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tez
Tessaracoccus sp. T2.5-30
Pathway
tez03030
DNA replication
tez03430
Mismatch repair
tez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM78_12770
03430 Mismatch repair
BKM78_12770
03440 Homologous recombination
BKM78_12770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tez03032
]
BKM78_12770
03400 DNA repair and recombination proteins [BR:
tez03400
]
BKM78_12770
Enzymes [BR:
tez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM78_12770
DNA replication proteins [BR:
tez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM78_12770
DNA repair and recombination proteins [BR:
tez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM78_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
Motif
Other DBs
NCBI-ProteinID:
AQX16685
LinkDB
All DBs
Position
complement(2752962..2754710)
Genome browser
AA seq
582 aa
AA seq
DB search
MPDISPAQPSFEDLGVHLSDVTFVVVDLETTGGGADSEITEVGAVKVRGGQVVGEFQTLV
RPSAPIPPMIQVLTGITNQMVASAPPPSQVLPAFAEFAAGAVIVAHNARFDTGFLRRGYE
ELGLPWPRPTVVDTVALARTALLRDEVPNCKLATLARYFRAATEPNHRALSDARATVDVL
HGLLERVGNLGVHTLEDLTEFALQVSPDRRAKRTWASNAPECAGVYYFYADSTTPEGEAK
REVLYVGKSTNLRRRVRSYFSAAEKRGRIHEMVRVASGVEFVPCATDLEAEVRELRMIES
LAPRYNRRSKNQRKISWLKLTDEAFPRLSIVTKVREDGTYFGPFRSRDAAEEAALTLYDA
FLLRRCTTRLSPRKESTACALAEMGRCVAPCRLGDGAAAYPAIAQAVTDSWLTDVRPVLR
SVRLRMRKLVEQERFEEAGTISDRLTAYYRTSIRFHRIRSLALCRQLVAAIPSAQGWDIH
VIRYGKLAAATTAPSAQARLAAEEAAATAETVLAPSGGLPAGSVEEAERIAAWLELPGVR
LIETDGDWAWPVNAGLPEGALAAELLGPEPCLPLEPAIRLAS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgccggacatctcccccgcacagccgtccttcgaggacctcggtgtgcatctctcggac
gtcaccttcgtggtggtggacctggagacgacggggggcggggccgattcggagatcacg
gaggtcggcgcggtgaaggtccgcggcgggcaggtcgtcggcgagttccagacgctggtg
cggccgtcggcgcccatcccgccgatgatccaggtcctcaccggcatcacgaaccagatg
gtggcgtccgctcccccgccgtcgcaggtgctgcccgcgttcgcggagttcgcggccggg
gcggtgatcgtggcgcacaacgcccgcttcgacaccggcttcctgcgccgcggctacgag
gagctgggcctgccgtggccgcgccccaccgtcgtcgacaccgtcgcgctggcccgcacc
gccctgctgcgcgacgaggtgcccaactgcaagctcgccaccctcgcgcggtacttccgc
gccgccaccgagcccaaccaccgggcgctcagcgacgcccgcgcgaccgtcgacgtcctg
cacggcctcctggagcgggtcggcaacctcggcgtgcacacgttggaggacctgacggag
ttcgcgctgcaggtgtcgccggaccgccgggccaagcggacgtgggcgagcaacgccccg
gagtgtgcgggcgtctactacttctacgcggactcgaccacgcccgagggcgaggcgaag
cgggaggtgctctacgtcggcaagtccaccaacctgcgccgccgggtgcggtcctacttc
tcggcggcggagaagcgcgggcggatccacgagatggtgcgggtggcgtccggggtggag
ttcgtgccgtgcgccacggacctcgaggcagaggtgcgggagctgcggatgatcgagtcg
ctggcgccgcgctacaaccgccggtcgaagaaccagcgcaagatcagctggctgaagctg
accgacgaagcgttcccgcggctgtcgatcgtcacgaaggtccgcgaggacggcacctac
ttcggccccttccgctcccgcgacgccgccgaggaggccgccctcaccctctacgacgcc
ttcctcctgcgccgctgcaccacgcggctgtcaccgcggaaggagtcgacggcgtgcgcg
ctggcggagatggggcgctgcgtcgcgccgtgccggctgggcgacggcgccgccgcgtat
cccgccatcgcgcaggccgtgaccgacagctggctcaccgacgttcgccccgtcctgcgc
agcgtgcggctgcggatgcgcaagctggtcgagcaggagcggttcgaggaggccggcacg
atctccgaccggctgaccgcctattaccggacctccatcaggttccaccggatccggtcg
ctggccctgtgccggcagctggtcgcggccatcccgtccgcgcaggggtgggacatccac
gtcatccgctacggcaagctcgcggcggccacgacggcgccgtcggcccaggcgcggctc
gcggccgaggaggccgccgccacagcggagaccgtgctggctcccagcggcgggctgccg
gcgggcagcgtcgaggaggcggagcggatcgcggcgtggctggagctgcccggggtgcgg
ctgatcgagaccgacggcgactgggcctggcccgtcaacgccgggctgcccgagggcgcg
ctggcggcggagctgctcggcccagagccgtgcctgccgctggagccggcgatccgcctc
gcctcctga
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