Turicibacter faecis: T23_05420
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Entry
T23_05420 CDS
T10156
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tfc Turicibacter faecis
Brite
KEGG Orthology (KO) [BR:
tfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfc03019
]
T23_05420 (yhaM)
Messenger RNA biogenesis [BR:
tfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
T23_05420 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BEH90440
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All DBs
Position
617387..618316
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AA seq
309 aa
AA seq
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MQIKDLKAKEDTTLTVMIKSVQSLRTAAQKPYLKFEFVDKSGSIFANKWSVKPSELEAFS
AGQIVTVKGLVQLYNAQKQWNIESISVVEGDVDPADYVESSSMTVESLKEYMGQFMGQMQ
EGYYKEILQYFLDKYEQEFYVHPAASRMHHAFRSGLAQHVFEMLKMGEAYCELYPIVNRD
LLYAGIILHDLGKLFEMSYEKCVKTEYTLEGLMVGHINMMVSMIDEASRELGYQGEEVLF
LKHMVIAHHGKLEWGSPKEPMIIEAELLHYLDVVSAKMTAATMALQHCAAGEMSDRIPML
DNRRFYHHK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagatttaaaagcaaaagaggatacaacattaactgttatgattaagtct
gttcagtcgctaagaacggctgcacaaaaaccgtatttaaaatttgaatttgtagataag
agtggttcgatttttgcgaataagtggagtgtgaaaccgagtgagttagaagctttttcg
gcaggacaaattgtgacggtcaaaggattggttcaactttataatgctcaaaagcagtgg
aatattgaatccatttctgtggtagagggggatgtcgatcccgctgattacgtcgaatct
tcttcaatgacagttgagtcattaaaggaatatatggggcagtttatggggcaaatgcaa
gagggatattataaggagattcttcaatacttcttagacaaatatgaacaagaattttat
gtgcatccggcagccagccgaatgcatcatgcctttcgctcaggactagctcaacatgtt
tttgaaatgttgaaaatgggagaagcttattgtgagctttatccgattgtaaatcgtgac
ttgctctatgctggaattattttgcatgaccttggaaaattatttgagatgagctatgaa
aagtgtgttaagacggagtatacgcttgaggggttaatggttggacatattaatatgatg
gtttcaatgattgacgaagcttctcgtgagttaggctatcaaggggaagaggtattgttt
ttaaagcatatggttattgctcatcacgggaaattagaatggggttcacctaaggaacct
atgattattgaagctgaattactacattatttagatgttgtctctgctaagatgacggca
gcgacgatggcgcttcagcactgtgccgctggagaaatgagtgatcgtattccgatgtta
gataaccgaagattttatcaccataaataa
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