Turicibacter faecis: T23_11880
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Entry
T23_11880 CDS
T10156
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tfc Turicibacter faecis
Brite
KEGG Orthology (KO) [BR:
tfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfc03016
]
T23_11880 (truB)
Enzymes [BR:
tfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T23_11880 (truB)
Transfer RNA biogenesis [BR:
tfc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T23_11880 (truB)
Prokaryotic type
T23_11880 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BEH91086
UniProt:
A0ABM8IIN3
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All DBs
Position
complement(1298516..1299415)
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AA seq
299 aa
AA seq
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MDGVLLLDKPAGMTSHDCVNIARKVLKTKKVGHTGTLDPNVTGVLPLCIGRATKISQFLT
ANEKEYLGEVTLGFSTTTEDADGEMVDRQFVEGEITEEDVKSVFNEMMGPSIQVPPMYSA
VKVNGKKLYEYARAGIEVERPKREVTIENLELTSQITKTDDGLVKFSFRVRGSKGLFVRT
VAVTIGEKLGYPAHMSYLRRVASGSFKIESCLTMEEFKQRAEQGTLTLMSVEEAMSAFPS
VTVDAWVEKLVRNGVQLHHEQVKQTAYSPVALFSRDGKCLAVYEKHPTREVYRSVRGFF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtcttattattagataagccagcagggatgacgtcccatgattgtgtaaat
attgcgcgaaaagtattgaaaacgaagaaagtgggacatacggggacacttgatcctaat
gtaacgggcgtcctaccgttgtgcataggtcgggcaacaaaaatttctcagtttttaacg
gcgaatgaaaaggagtatttaggggaagtgaccttaggtttttcgacaacgactgaagac
gctgacggagagatggtcgatcgtcaattcgttgaaggggaaatcacagaggaggatgta
aaatctgttttcaacgaaatgatggggccaagtattcaagttccgccgatgtactcggct
gtcaaagttaatgggaaaaagttatatgagtatgcacgagcgggaattgaggtcgaacgt
cctaagcgcgaggtgacgatcgaaaatcttgaattaacaagtcagattacgaaaacagat
gacgggcttgtgaaattcagttttcgtgttcgaggaagtaaggggttgtttgtccgaacc
gttgcagtgactattggtgaaaaattaggttatcccgcgcatatgtcttatttaagacga
gtcgcatcgggctcttttaaaattgaaagttgtttaacaatggaagagtttaaacaacga
gctgaacaaggaacgttaacattgatgtccgtcgaagaggccatgtctgcctttccatcg
gtcacggtagatgcttgggttgaaaagttggttcgtaatggtgttcaacttcatcatgag
caagtaaaacaaacagcgtactcgccggtcgccttgtttagccgtgatgggaagtgttta
gccgtttatgaaaaacatccgacacgtgaggtttatcgttcggtacgtggattcttttag
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