Turicibacter faecis: T23_12680
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Entry
T23_12680 CDS
T10156
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfc Turicibacter faecis
Pathway
tfc03420
Nucleotide excision repair
tfc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T23_12680
03430 Mismatch repair
T23_12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfc03400
]
T23_12680
Enzymes [BR:
tfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T23_12680
DNA repair and recombination proteins [BR:
tfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T23_12680
MMR (mismatch excision repair)
Other MMR factors
T23_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BEH91166
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All DBs
Position
1380715..1382907
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AA seq
730 aa
AA seq
DB search
MADALSVYLLDNYNITLTPEQKQAVEALDGPTCVISCPGSGKTTVTVIRLANLIVKGNVS
PHQILALTFSKASAKDMNERFQSLFPTLAPHVKFSTIHSFAFHVIRHFEKITGSHYQFIE
STAPSHINKKQLLSAIYLEQTERYLSDDEYETLTGQISLLKNLMISPSQTNEIKQYVEEE
QALFIQIYRAYEAKKEAHHFLDYDDLLTTAFYILKNHDSLRNFYQQKYTHIQIDEAQDTS
KIQYEFIKLLAAPLNNLFLVGDDDQSIYAFRGAYPKQLLDFKKTYPEATFIYLTDNFRSS
KDIVDLSSRFISSNTERYPKEIKTPNPKGPLPILHHFQNEREQFDYLIEQLKQINNLNQV
AILYRQNVSAISLIEHLERNQLPFCLQEGRISFFSHPIVKDIVAFFHLSLYPQDAEAFKR
IAKVLYLSAATISAALSQTKNSYLDFLTQEVTFKTTFQQKKIRKFKLLLPKIITLPPRRA
INYILDSLDYESYLVKKGFLKDEKERTYTQGIAIIETLKGIATETSDVHEFLNRLSHLYR
LSHQNITSAQNAVRLLTFHASKGLEFDTVFLIDCMDGITPSSNALTQHLLKDDAEFEEER
RLFYVAMTRARHQLYLLSISSKHNMIFDRSIFIKEVHKILNPNPQFQSNESTKRTLSGKK
INDLKILPGSLVNLDDYTVGTLISHQQFGDGIITDREGEIATIQFHSSKQEKRISLKITV
SNGNLTLKSS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcactaagcgtttatttacttgataattacaatataacacttacccctgaa
caaaaacaggcggttgaagccttagatggaccgacctgcgttattagctgtcctggaagt
ggaaaaacgacagtcactgtcattcggcttgccaatctaattgttaagggaaacgtttca
cctcatcaaattttagccttaaccttttctaaggcttcagctaaagatatgaatgagcgt
ttccaatccctttttccaacgttagcccctcacgtgaaattctccactattcatagtttt
gcctttcacgttattcgacacttcgaaaaaataaccggatcgcattaccaatttattgag
tcgaccgcaccatctcacataaataaaaaacaactcctttctgccatctaccttgaacaa
accgaacgttatttaagcgatgatgaatatgagaccttaactggacaaattagtcttcta
aaaaatctaatgatttctccgagtcaaacaaatgaaatcaagcaatacgtcgaagaggaa
caggcattatttatccaaatttatcgggcatatgaagcaaaaaaagaagcccaccatttt
ctcgattatgatgatttgttaacaaccgccttttacatcttaaaaaaccatgattcctta
cgaaatttttatcaacaaaaatatactcatattcaaattgatgaagctcaagatacctcg
aaaattcaatacgagttcattaaactacttgcggcccctttaaataatcttttcttagtg
ggcgacgacgatcagagtatttatgcgtttcgcggtgcctaccccaaacaactattagat
tttaaaaaaacatatccagaggcaacctttatctatttaaccgataattttcgttctagc
aaagacattgtcgacctttcgtctagatttattagttctaataccgagaggtaccctaag
gagattaaaacccctaatccaaagggtccccttcccattcttcatcattttcaaaatgaa
cgcgaacaatttgattatctcatcgaacaactaaagcaaataaataatcttaatcaagtg
gcaattttataccggcaaaatgtctctgctatctcactcatcgaacatttagaacgaaat
caattacctttctgtttacaagagggacgtatctcctttttttcacatcccattgttaaa
gatatcgtcgccttttttcacttgtctctttatcctcaagatgccgaagcttttaaacgc
attgcaaaggtgctatatttatcggccgccacgatctcagcggcactttcgcagactaaa
aactcataccttgactttctaacccaggaagttacctttaaaacgaccttccagcaaaag
aaaattagaaaattcaaactccttcttccaaaaataatcactcttccaccaagaagagcc
attaactatattttggattcccttgattatgaatcctatttggtaaaaaagggattttta
aaggatgaaaaggagcgtacttatacccagggaattgctatcattgaaacattaaaaggt
atcgcaacggaaacgagcgatgtccatgaatttttgaatcgattatctcatctctatcgc
cttagccatcaaaatataacatctgctcaaaatgccgttcgcctgctcactttccacgct
tcaaaaggattagaatttgacaccgtgtttctgatcgactgcatggatggaataactccc
tcttcaaacgcgcttactcaacaccttttaaaagatgatgcagagtttgaggaagaacga
cgacttttttatgtagccatgacgagagcgcgtcatcagctataccttctgagtatttct
agtaagcataacatgatttttgatcgctccatctttatcaaagaagtccataaaatcctg
aatcctaatccacaattccaatccaatgaatctactaaacgtacattaagcggtaagaaa
ataaatgatttgaaaattttacctgggtctttagttaatttagatgattatacggttgga
acattaatttctcatcaacaatttggtgacggaattattacggaccgtgaaggagaaatt
gctactattcaatttcattcatccaaacaagaaaaacgtatcagtttaaaaattacggta
tcaaacggaaatcttactttaaagtcctcttaa
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