Turicibacter faecis: T23_14880
Help
Entry
T23_14880 CDS
T10156
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tfc Turicibacter faecis
Pathway
tfc03410
Base excision repair
tfc03430
Mismatch repair
tfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T23_14880 (recJ)
03430 Mismatch repair
T23_14880 (recJ)
03440 Homologous recombination
T23_14880 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfc03400
]
T23_14880 (recJ)
DNA repair and recombination proteins [BR:
tfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
T23_14880 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T23_14880 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
T23_14880 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
ThiG
LRR_13
DNA_ligase_A_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BEH91386
UniProt:
A0ABM8IJG6
LinkDB
All DBs
Position
complement(1609944..1612169)
Genome browser
AA seq
741 aa
AA seq
DB search
MLKSMMNWRKCDILDESMQGERGELHPAIERLILSRKLVEPENLATFNHQVPVHHDPLLF
SQMSKIIMRLNTAIDEGQPILVYGDYDADGVTGTSILVRCLRELGALVDYYIPNRFYEGY
GPNKEAFMQAIEDGFQLVITVDNGIAGIEEAELLMEHGVDLIITDHHQVKETLPRAYAIL
HPELDKNYPFHHLSGAGVALKIAEALLEEVIPEDYYAIAMLGTIGDVVPLIDENRSIVKR
GLAALKETEIEGLNAIMEMANTNKNEVTEVNVGFEICPRLNAPGRMDEATLAVKCLICED
QDEATELAQQIEQINTERQKTTQQVLEEVMKMVDQETLAVKKALILYAPHWHEGILGIVA
GRLAKQWQKAVFVVTDDHEGFIKGSARAVEGYHLFELLTQCQSLIERFGGHALAAGITFD
KKNLQPLENQMNELLKDTDLKPSLTVDLCLPISDLDVSFVDQLQCLAPFGEGNRPPLFEM
RDVYVSNVKVIGNKMQHLKFTLEQDGNCLEGIAFNQAHLSTYLTKDTRFSFVGELKINEW
NGHRNVQFHFVDVLCEEFQLIDLRNKQAYEQRKDDLFLATSYAKAKDENHIETLVIDQLP
NSKEELIGLIREKKPNNIVIAPIDSNITFASREKFVTVYRVIKQHAPITLNHQMMNYFLR
LGISKNELLFILQVFFEVELVIIKNGSVFLPDCIAKRDLSEAATYQLQNSKLKMLEFFEL
TTWTELKHIFTTAREEMTDES
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaaatcgatgatgaattggagaaaatgtgacatattagacgaaagtatgcaggga
gagagaggtgaactccacccggcgattgaacgtcttattttatctagaaagttagtagaa
ccggaaaatcttgcaacatttaaccatcaagtgccggttcaccacgatccgttattgttt
tcgcaaatgtctaaaattattatgcgacttaatacggccatagatgagggacaaccgatt
ctagtctatggcgattacgatgcagatggggtaactggaacatctattttagttcgttgt
cttcgcgagctaggagctttggttgattattatattccaaatcgattttatgagggatat
ggcccgaataaagaagcgtttatgcaggcaatagaggatggttttcaattagtcattacg
gtagacaacggaattgccggaattgaagaggcggaattgttgatggaacatggggtagat
cttattattacagatcatcaccaggtaaaggaaacacttccccgcgcgtatgctatcttg
catccggagcttgataaaaattatccgtttcatcacttatcaggcgcgggggttgcgttg
aagatagcggaggcattactagaggaagtcattcctgaggattattatgctattgccatg
cttggaaccattggtgatgttgtcccgttaattgatgaaaatcgatcgattgtgaaaaga
ggtcttgccgccttaaaggaaacagagattgagggattgaatgccattatggagatggcc
aatacgaataagaacgaggtaacagaggttaacgtagggtttgagatttgtccccgccta
aacgctcctggtcgtatggatgaggcgacgctagctgtaaagtgtttaatttgtgaggat
caagatgaggcgacggagctggctcaacaaattgaacaaattaataccgaacggcaaaag
acaacacaacaagtattagaagaagtgatgaaaatggtagatcaggagactttagcagtg
aaaaaggcgttaattctatatgctcctcattggcatgaggggatacttggaattgtagct
gggcgtttagcaaagcagtggcagaaggctgtctttgtagtgacagatgatcacgaaggt
tttattaaagggtcggcacgagcggtagaaggataccatttatttgaattattaacgcaa
tgtcaatcactgatagaacgctttggtggacatgccttggcagcaggaattacatttgat
aaaaaaaatcttcaacctcttgaaaatcaaatgaatgaacttttaaaagatacggatctt
aagccctctcttaccgttgatttatgcttacctatctcagatttagatgtttctttcgtt
gatcaattgcagtgcctggctccctttggagaagggaatcgcccacccttatttgaaatg
cgagatgtatatgtaagcaacgtaaaagtcatcggaaacaaaatgcagcatttaaaattt
acactcgaacaagatggaaattgtctggaaggcattgcctttaatcaagcccatttatcg
acttatttgacgaaagatacacggtttagttttgtaggagaactgaaaattaatgaatgg
aatgggcatcgaaatgttcaatttcactttgttgacgttttgtgtgaggagtttcaatta
atcgatttgcgtaataaacaggcgtatgaacaacgaaaagatgatttgttcttggcaacg
tcttatgcaaaggcgaaagatgaaaatcatattgaaacattagttattgatcaactaccg
aattcaaaggaagaattaataggactcattcgagagaaaaagcctaataatattgttata
gcgcctatcgattcgaatataacgtttgctagtcgtgagaaatttgtcaccgtttatcgg
gtgattaaacaacatgcccctatcacgctaaaccaccaaatgatgaattattttttaaga
ctgggaattagcaaaaatgaattattatttattttacaggtgttttttgaagtggaactt
gttataataaaaaatggttctgtttttttacccgattgcatcgcaaagcgcgatttatca
gaggctgcaacgtatcaactccaaaattcaaaattgaagatgcttgaattttttgaatta
acaacgtggacagaattaaaacatatttttacaacagctagggaggaaatgactgatgaa
tcttaa
DBGET
integrated database retrieval system
