Turicibacter faecis: T23_15680
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Entry
T23_15680 CDS
T10156
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tfc Turicibacter faecis
Pathway
tfc03030
DNA replication
tfc03410
Base excision repair
tfc03420
Nucleotide excision repair
tfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T23_15680 (polA)
03410 Base excision repair
T23_15680 (polA)
03420 Nucleotide excision repair
T23_15680 (polA)
03440 Homologous recombination
T23_15680 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfc03032
]
T23_15680 (polA)
03400 DNA repair and recombination proteins [BR:
tfc03400
]
T23_15680 (polA)
Enzymes [BR:
tfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T23_15680 (polA)
DNA replication proteins [BR:
tfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T23_15680 (polA)
DNA repair and recombination proteins [BR:
tfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T23_15680 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T23_15680 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
BEH91466
LinkDB
All DBs
Position
complement(1701829..1704489)
Genome browser
AA seq
886 aa
AA seq
DB search
MLWIRIDAMNTLVLIDGNSLMYRAYYATAYSGNLMKTSTGIFTNALYGFVNMMNKVLDDY
NHTHMLVAFDAGKTTFRHEFLESYKDGRKPMPDEMRSQINLIKKYLDLLGVKRLELATYE
ADDIIGTLSTQAKGDNFDKVHIITGDKDLLQMVDEKTIVHITRKGVTDIESFDEAAVFAK
YEVSPQQIVDLKGLMGDPSDNLPGIPGVGEKTAIKLLKQFTTVENLVAHTDELKGKMREK
VEANVEQAILCKRMATIHKEVPLPLTFDDLRYEGPHVEELMAFFKEMEFNAFLKKIKMEE
SKESKPQLPIRIIQSEQELDQLTYQDSAIHVEVFEENYHRGTILGIAVVNQEEAYYAPFE
LAKKSEAFLSFLSCSTYKKSIFDVKRSRVALMWEGLPLEGVDFDLLLATYILNPTNGSRE
FKKVVMHYDYDGVSYDEEVYGKGAKRAVAAPEKVARYAIDIATAVFKLKNQILEQLREQG
QLELFEEMEMPLADVLATMEFNGMALDLNGLEEMGETLKSRLVALESSIFEQAGMSFNIN
SPKQLGEVLFEKLSLPVIKKTKTGYSTNADVLEKLCDEHPIIHLIMEYRTLSKLYSTYIE
GLKKACYDDGKVHTIFNQALTQTGRLSSVEPNLQNIPIRLEEGRMIRKAFVPSQEGWLIL
GADYSQIELRILAHISNTESLIEAFKQGDDIHKKTAMDVFKVSEEEMTSDLRRSAKAINF
GIIYGMSAFGLSENLNITQKEAKKYIDHYLETYSGIHQYMEDIVKEAKYNGYVSTLFNRR
RYIPELTQKNYAIRQFGERTAMNAPIQGTAADIIKKAMIDVSRMMQEKKVQSRLLLQVHD
ELIFEVPENELELMIELVTKTMEDVVELKVPLKADYSYGPTWYDAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgctatggataaggattgatgcaatgaatacgttagttttaatcgatggaaatagtttg
atgtatcgcgcctattatgcgacggcatatagcgggaacctcatgaaaacaagtacagga
atatttacaaacgctttatacggatttgtaaatatgatgaataaggtgttagatgattat
aaccatacgcatatgttggtcgcctttgatgctggtaagacgacatttagacatgaattt
ttagaaagttataaagatggacgcaaaccgatgccagatgagatgcgttcacaaattaat
ttgattaaaaaatatttagaccttttaggggttaagcggttagagttagcaacttatgaa
gccgatgatattattggaaccttatcaacgcaggcgaaaggtgataattttgacaaggtg
catattattacgggggataaagatttactgcaaatggtcgacgagaaaacgattgttcat
attacacgtaaaggtgtgacagacattgagtcgtttgatgaggccgcagtttttgcaaaa
tatgaagtgtctcctcagcaaattgtagatttaaaagggttgatgggggacccttcggat
aatttaccaggaattcctggagtgggtgagaagaccgcgattaaattattaaaacaattt
acaacggttgaaaatctagtggcacatacagatgagttaaaaggtaaaatgcgagaaaag
gtagaggcaaacgttgaacaggccatattatgtaaacgaatggcgactattcataaggaa
gtcccgcttccactaacctttgatgatttacgttatgagggaccccatgtcgaagaattg
atggccttctttaaggaaatggagtttaatgcctttttgaagaagataaaaatggaggag
tcaaaagaatcaaaaccacagctccctattcgaatcattcaaagtgaacaagagttggat
cagttaacttatcaagatagtgctattcacgtagaggtcttcgaggaaaattatcatcga
ggcacgattttaggaatagcagttgttaatcaagaagaggcttattatgctccatttgaa
cttgcgaaaaagagtgaggcgttcctttcatttttaagttgttcgacgtataagaagtct
atttttgacgtgaaacgctcacgtgttgcactcatgtgggaaggcttaccattagaaggg
gttgattttgatttattattagcgacgtatattcttaacccaacgaatggtagtcgagaa
tttaaaaaggttgttatgcattatgattatgatggggtatcatacgatgaagaggtttac
gggaaaggggctaagcgggccgttgccgcaccagaaaaggttgcgcgttacgcaatcgat
attgcaacggcagtctttaagctaaaaaatcaaattcttgagcaactgcgtgaacagggg
caactagaactatttgaagagatggaaatgccattggccgatgttttagcaacgatggag
tttaacggaatggcacttgatttaaatggtttggaggagatgggagaaacgttgaagtct
cgccttgtagcgctcgaatcgtctatctttgaacaggcaggaatgtcgtttaatattaat
tcccctaaacaactaggagaggtactatttgaaaagttatcattgccggtgattaaaaaa
acgaagacgggttactcaacgaatgccgatgttctagaaaaattgtgtgatgaacatccg
attattcatttaatcatggagtatcgaacattgagtaaattatattctacgtatattgaa
ggtttaaaaaaggcgtgttatgacgatgggaaggttcacaccatttttaatcaagcgtta
acccaaacaggtcgattgtcatcggtcgaacctaatttacaaaatattcctattcgttta
gaagagggaagaatgattcgaaaagcgtttgtcccaagtcaagaaggttggttgatttta
ggggccgattactcacaaatcgagcttcgtattttggctcatatttcaaatacagagtca
ttaattgaggcctttaaacagggggacgacattcataagaaaacagcaatggacgttttt
aaagtgtcagaggaagagatgacgtcagatttaagacgctctgcaaaggctattaacttt
ggaattatttatggaatgagtgcttttggtttatctgaaaatttaaatatcactcaaaaa
gaggcgaaaaaatatattgatcattatttagaaacgtattcgggcattcaccagtatatg
gaggatattgtcaaggaagctaaatataatggctatgtttcgacgttgtttaatcgtcga
cgctatattccagagctaacgcaaaaaaactatgcgattcgacaatttggagaaagaaca
gcgatgaatgcaccgattcaagggacagcagcggatatcatcaaaaaggcaatgatcgac
gtgtcccgtatgatgcaggaaaaaaaggtacagtcacgtttgttattacaggtacacgat
gagttaatatttgaagttcctgagaatgaattggaattgatgattgagttagtgacaaaa
acgatggaggacgttgttgaattaaaggttccattaaaagccgattattcgtatggtcca
acctggtatgatgcaaaataa
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