Tachysurus fulvidraco (yellow catfish): 113633916
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Entry
113633916 CDS
T08119
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113633916 (lrrc4ba)
04517 IgSF CAM signaling
113633916 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113633916 (lrrc4ba)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
NGL family
113633916 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
113633916
NCBI-ProteinID:
XP_026988361
LinkDB
All DBs
Position
15:complement(22688725..22730216)
Genome browser
AA seq
726 aa
AA seq
DB search
MRITTVTGLPNPSPFFFLLAQLQFWLLLLGQDIAGATSTCPTPCSCSNQASRVICTRRNL
DEVPENISNNTRYLNLQENSIQVIRSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTPLIRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVDPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAILNVTAADTSVNYTYFTTVTVETVESTGEEDSALRSINETIIHIPGPT
PSGRLWHDGISTTASSLSVFGSSSSPRATKPTFTVSVSEPSYPTGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEILNVEDELGASASVLGSGISGGSTMP
QAGSSGGSQSLRLHHPEIVNLPNLARTDHLNHYYKPHHFNNNMMSFSGSSGMGLNNNNNP
CSQTQPMPISCSQVPVSVSSIPSSMPLPTLSIHGSLKGLMGKGQNPQIEPLLFKSGSKEN
VQETQI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacggtgactggccttccaaacccctcccccttctttttcctattggcc
cagctacagttttggctcctcctcctgggccaagacatcgcaggagccacatcgacctgc
ccgacaccttgcagctgctccaatcaagcgagccgagtgatctgtacgagacgaaacctg
gacgaggttccggaaaatatatccaacaacacgcgatacctcaacttacaggagaactcg
atacaggtgataagatcagataccttcaagcacttacggcacttggagatcctccagctt
tccaagaaccagattcgtcagattgaagtcggtgcattcaatggcctcccgaacctcaac
actttggaactgtttgacaaccgtctcacactggtgccatcacaggcgttcgagtatctc
agcaagcttcgggagctctggcttcgaaacaacccgattgagacactgccaggctatgcc
ttccaccgcgtgccctcccttcgccgtcttgatctgggcgagctcaaaaagctggactac
atttcagacgctgcctttgttggtcttgttaatctgcgctacctgaacctgggcatgtgt
ggcctgaaggacatccccaacctgacaccactgatccggctggaggaactggagctttct
ggaaacaggctggaaatcattcggcctggatcattccaaggtctggagtctttgcgcaaa
ctgtggcttatgcactcccagatgtctgtcatagaacgcaatgcctttgatgacctcaag
agtctggaagaattgaatctatcccacaattctttgcattcactgcctcatgacctcttc
acgccattgcagaagctggagagagtgcacctcaaccacaatccctgggtgtgcaattgt
gacgtgttatggcttagctggtggctgaaagaaaccgtaccaagcaacacaacttgctgt
gcccggtgccatgcaccaccatacctgaagggcaaatacattggagagctggaccaaagc
cacttcacatgctatgccccagttattgtcgatcccccgactgacctcaacgtgaccgaa
ggcatggctgctgaactcaagtgccgcacaggaacctccatgacgtctgtaaactggatt
actcccaatggaaccctgatgacgcatggatcatatcgggtccggatctctgtgctgcat
gacggaactctgaattttacaaatgttaccttgcgtgacactggtcagtacacctgcatg
gtgaccaactcggcaggcaacaccacagcgactgccatcctgaatgtcactgcagcagac
accagtgtcaattacacttactttactaccgtgactgttgaaactgtggaatctactgga
gaagaggattcggccttacgttcgatcaatgagactattatccacatccctggacctaca
ccttctggacgtctctggcatgatggcatctctacaacagcttcttctctatcagttttt
ggatcctcgtcttctccccgagcaaccaaaccgacatttactgtttcagtctctgagccg
agctaccccaccgggctggatgacgtaatgaagactaccaagatcatcatcggctgcttt
gtggctattaccttcatggcagctgtcatgctggtggtcttctacaagctgaggaagcag
caccagttgcacaagcaccacggacctacgagagccattgaaatcctcaatgtagaggat
gaactcggagccagcgccagtgttcttggaagcgggatttctggtggatccaccatgccc
caggccgggtctagtggaggaagccagagcctgaggctgcatcatccagagatcgtcaat
ctacccaacctggcacggacggaccaccttaaccactactacaagccccaccacttcaac
aacaacatgatgagtttctctggaagctctggaatgggcctcaacaacaacaacaaccct
tgttcccagacccagcccatgccaatctcctgctcccaggtgcctgtctctgtgagctcc
attccctcctcaatgcctctgcctacccttagcatccatggatcactcaaaggcttaatg
ggtaaagggcagaaccctcaaatcgagcctttactctttaagagtggctccaaggagaat
gtccaagagacacagatctaa
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