Tachysurus fulvidraco (yellow catfish): 113634220
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Entry
113634220 CDS
T08119
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X2
KO
K08331
autophagy-related protein 13
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04136
Autophagy - other
tfd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113634220 (atg13)
04136 Autophagy - other
113634220 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113634220 (atg13)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113634220 (atg13)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113634220 (atg13)
Atg1 complex
113634220 (atg13)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113634220 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
113634220
NCBI-ProteinID:
XP_026988829
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All DBs
Position
1:complement(12165028..12184709)
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AA seq
512 aa
AA seq
DB search
MDSDLSPQDRKDLDKFIKFFVLKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIPE
VTHEAKKALAGQLPTVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYTR
LSLLLKSLLAITRVTPAYKLSRNQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGVVGTPT
GTLTLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPLGNTALMHPCNYRAPGEEEGG
VYAGVEDSQEVCTTSFSTSPPSQLCTSRLSYQTPLLGPVDLCHPTAYTAAAHPHQIAVPG
KEGGVPQVLVQPSHGTQADHGRVPSCPTADIPHPPPSNYSSGDTDVLSRSSEGKSASPLD
APQTTFTRKVGAFVNKPTTQVTTASLDLPFAAFAPRGYDLEENDPMVQPPASPTSSSPLQ
DSLHSQSSSQSGGQAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLSIDVSA
QSMAEDLETLPEKLAIYEQNIDEFDKFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatctgagcccacaggacaggaaagacttggacaaattcataaaatttttt
gtcttaaagacagtgcaggtgatagtacaggctcgtttaggtgagaagatctgcactcgc
tcgtcctcttcccccacaggctcagactggttcaccctggcaattaaagacatcccagag
gtgacccatgaagctaaaaaagctctggccggacagctgcccactgttggacgctccatg
tgtgtggagatttccctgaaaacatcagagggggattcaatggaactggaaacatggtgc
ttggagatgaacgagaagtgtgaaaaggacattaaagtctcctacacggtttacacgcgt
ctgtccctgctcctgaaatctctcctggccatcaccagagtaacccctgcttacaaactg
tcacgcaatcaaggccatgattatgtcatcctgtacaggatatattttggcgatgtgcag
ttaacaggactgggtgaaggttttcagacagtacgtgtaggagttgtaggtactcctaca
ggaactctcacactctcctgtgcataccgcaccaatctggccctcatgtcctccaggcag
tttgagaggacgggtcccatcatgggcatcatcatagaccactttgtggagcgtccgctc
gggaacacagccctcatgcacccctgcaactacagagctccaggtgaggaagaaggaggg
gtttatgctggagtggaggactcgcaggaagtgtgcaccacctccttttccacttctcca
ccttctcagctttgcacttctcgtctgtcatatcagactcccctcctggggccagtagat
ttgtgccatcctactgcctacactgctgctgcccacccacaccagatagcagttccaggg
aaggaaggtggagtcccacaggtgctggttcagcccagtcatggcactcaggcagaccat
gggcgtgtcccgtcctgccccaccgcagacataccacaccctccaccctccaactacagc
agtggtgatacagacgtgttgtcacgaagtagcgaagggaagagcgcgtcccctttggac
gccccccagacgacctttaccaggaaagtgggagcctttgtcaacaaacccaccactcag
gtgaccactgccagtctggacctgccgtttgctgcgtttgctcccagaggttacgacctg
gaggagaacgaccccatggtacagccgccagcatcacccacctcctcgtctccattacaa
gacagtcttcactcccagagctccagccagagtggaggacaagcacaagatgactttgtc
atggttgactttaaaccagcgttctctaaagacgacctgttgccgatggacttgggcacc
ttttacagagagtttcagaatcctccgcagctcacaagcctttccatcgacgtcagcgct
cagtctatggctgaggacttggagactctgccagagaagctggccatctacgagcagaac
atcgatgagtttgacaaatttgtggatacactacagtga
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integrated database retrieval system
