Tachysurus fulvidraco (yellow catfish): 113634372
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Entry
113634372 CDS
T08119
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113634372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113634372
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113634372
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113634372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Baculo_IE-1
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
113634372
NCBI-ProteinID:
XP_026989088
LinkDB
All DBs
Position
25:complement(1221044..1222490)
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AA seq
398 aa
AA seq
DB search
MNPTRRAEEILGEIHSDLLECKVCFETFSSEPRARRPRNLPCGHVICLGCVCSLSHAVSR
HLECPFCRKQCDQGDTYECQVLVDLQEMIGLYFPQKKNKECQKDLESGVMRLDCAFGGWG
PLINPTGVVVFGASRDVLVAHGGHQRVTAFGSRGQFLCSFGRYGHNSFDICHPLDLAVTP
DGHVVVTDAGDRSVKVFSSTGNPVITIPEFQLPWGVDVDISGTILVTDAETGTLWQIIMD
FRHGVVLVKKVMVKDLKTPRAVACCRASGRIAVVEHLQIRESSGGDATLTRLKVFSSDFI
LLKQMDALSFHPLKPSISAITFNRHGGLIVADVNQGLVWSLGDVQKAPELIPLVREGLVR
PVGLVATDEDTLIVLDAGDHTVKTYTSNFEDLYSDNKL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaccagaagagctgaggagatcctgggtgagatccactctgatctgctcgag
tgtaaagtgtgtttcgaaacattttcatccgaacccagagctcgaagaccacgcaacctc
ccctgcggtcatgtgatctgtctggggtgcgtctgtagcctgtctcatgccgtgtctcgc
catctcgagtgccctttctgcaggaaacaatgcgatcaaggcgacacctatgaatgccag
gttctggtcgaccttcaggaaatgatcggtttgtattttcctcaaaaaaaaaacaaagaa
tgtcagaaagatctggagtcaggagtcatgcgtctagactgtgcctttggaggatggggt
ccgctcatcaacccgaccggtgtagtcgtgtttggagcatcacgggatgttctggtggcg
catggaggacaccagagagtgaccgcgttcgggagtcgtggtcagttcttgtgcagtttt
gggcgctacggtcacaacagctttgacatctgccatcctttagatcttgctgttacacca
gacggccatgttgttgtcacagatgcaggagatcgctcagtcaaggtgttttcatcgaca
ggaaatccagtgatcaccatcccagagtttcagcttccttggggtgttgacgtggacatc
tcaggtaccatcttagtgacggacgctgaaaccggaacactttggcagatcatcatggac
ttcagacatggtgtggttttggtaaagaaggtgatggtgaaagatctgaagactccacga
gccgtcgcttgctgtagagcgtccggacgcatcgcggtggtggaacatctccagattcga
gaaagttcagggggcgatgctactctgacacggttgaaggtcttcagcagtgatttcatc
ctcctcaagcagatggacgctctcagttttcaccctctgaagccgagcatctcggccata
accttcaacagacatggaggtttaatcgtagctgatgtgaaccagggactggtgtggagt
ttgggagacgtccagaaagcaccagagttaattccactggtgagagagggactggtgcgt
ccagtgggattagtggcgaccgacgaggacacgctgatcgtcctggatgccggagatcac
acagtgaagacgtacacgagtaactttgaggacctgtacagcgataacaaattatga
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integrated database retrieval system
