Tachysurus fulvidraco (yellow catfish): 113634456
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Entry
113634456 CDS
T08119
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04137
Mitophagy - animal
tfd04144
Endocytosis
tfd04340
Hedgehog signaling pathway
tfd04350
TGF-beta signaling pathway
tfd04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113634456
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113634456
04350 TGF-beta signaling pathway
113634456
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113634456
04137 Mitophagy - animal
113634456
09144 Cellular community - eukaryotes
04520 Adherens junction
113634456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113634456
04121 Ubiquitin system [BR:
tfd04121
]
113634456
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113634456
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113634456
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113634456
Autophagy
Mitophagy
Other mitophagy associated proteins
113634456
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
HECT type E3
113634456
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113634456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
113634456
NCBI-ProteinID:
XP_026989225
LinkDB
All DBs
Position
5:complement(28075114..28134898)
Genome browser
AA seq
790 aa
AA seq
DB search
MHKLASALSQGVEVCLHSTLLFRHSHSGKGQEVAAPEGSCYRVLHYSTVLCAKNLSKKDF
FRLPDPFAKVVVDGSGQCHSTDTVRNTLDPKWNQHYDLYIGKLDSITISVWNHKKIHKKQ
GAGFLGCVRLLSNVINRLKDTGYQKLDLNKLGPNNNDTIRGQIVVSLQSTDRIGTGGPLV
DCSRLFDNDLPDGWEERRTATGRIQYLNHITRTTQWERPTRPASEYASPGRPLSCLLDEN
TPILSSNGASGITHTNSRAQERRVRSQRHRNYMSRTHLHTPADLPEGYEQRTTQQGQVYF
LHTQTGVSTWHDPRVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR
LSANLHLVLNPNGSRGMENPNLSRTPQLKEQPALCNLPEEVEDCLTAPKYKRDLVHKLKV
LRQELSQQQPQAGHCRIELCREEIFEESYRQVMKMRQKDLWKRLMVKFRGEEGLDYGGVA
REWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGH
YIDGGFTLPFYKQLLGKSITLEDMEAVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGQ
IIQHELKPNGKNIPVNEETKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFD
EKELELIVCGLGKIDIQDWRANTRLKHCTADSNVVKWFWKAVESFDEERRARLLQFVTGS
SRVPLQGFKALQGAAGPRQFTIQQIDANTNNLPKAHTCFNRVDIPPYENYNKLYDKLLTA
IEETCGFAVE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaactggcgtctgctctaagccagggtgttgaggtgtgtttacactcaactctt
ttgttccgtcactcacattctggaaaaggtcaagaggtcgctgctccggaaggttcgtgt
taccgtgttcttcactactccacagttctatgtgcgaagaacttgtccaagaaggacttc
ttcagactgccagacccctttgccaaagtggtggtggatggttctggtcaatgccactcg
acagacacagtcaggaacacgctggacccaaagtggaaccaacactatgacctttatatc
ggtaaactggactccatcaccatcagcgtatggaaccataagaaaattcataagaagcag
ggagcaggatttctgggctgtgtgcgtctcctctccaatgtcatcaaccgcctcaaagac
actggctatcagaagctggacctgaacaagcttgggcccaacaacaatgacaccatcaga
gggcagatagtggtgagcttgcagtccactgacaggataggaacgggaggtcccttggtg
gactgcagccgtctgtttgacaacgatttaccagatggttgggaggaaaggaggactgca
actggcaggattcagtatcttaatcacatcacacggacaacacagtgggaaagaccaacc
agacctgcctcagagtatgcaagccctggtcgacccctcagctgtctgctggatgagaac
acacccatccttagttctaatggagcctctggcatcacacacaccaactccagagctcag
gagagacgtgtccgctcacagagacacagaaactacatgagcagaacacacttacacacc
ccagctgatctgcctgagggatatgagcagagaaccacgcaacagggccaggtctacttc
ctccacacccagaccggggtgagcacatggcatgacccgcgagtgcccagggatctcagc
aatgtgaactgtgaagagctcgggccactcccaccaggctgggagattcggaacacagcc
acaggcagggtgtacttcgtggaccacaacaacaggaccacccagttcacagaccctcgt
ctctcagccaacctgcatctcgtcctcaatccaaatggatctcgtggtatggagaatcca
aacctcagtcgtactccccagctgaaggagcagcctgcgctgtgtaatctccctgaggag
gttgaagactgtttaactgctcccaagtataagcgggatctggtgcacaagctgaaggtg
ttgaggcaggagttgtctcagcagcaaccacaggctggccactgtcgcatcgagctctgt
cgagaggagatctttgaggaatcatatcggcaggttatgaagatgaggcagaaggacttg
tggaagaggctgatggtaaagttcagaggagaggagggccttgattatgggggcgtggcc
agagaatggctgtatttgttatcccatgaaatgctcaacccttactatggcctgttccaa
tactcacgtgacgacatctacacgcttcagatcaacccagattctgcagttaacccagag
cacctgtcctatttccactttgtgggtcgtatcatgggcatggcggtgtttcatggccat
tacatcgatggaggcttcactctgcccttctacaaacagttactgggcaaatccatcaca
cttgaggacatggaggccgttgacccggacctgcacaacagcctggtctggatactggaa
aatgacataacgggtgtactggaccataccttctgtgtggaacacaacgcttacggacag
atcatccagcacgagcttaaacctaacggcaagaacatccctgtcaatgaagagaccaag
aaggagtacgtcaggctgtatgtgaattggcgcttcctacatggaatcgaagctcagttt
ctggctctgcagaaaggtttcaacgaggtcataccccagcacctacttaaggcctttgat
gagaaggagttggagctgattgtgtgtggcctggggaagatcgacatccaggactggagg
gcaaacacgcgcctgaagcactgcactgctgacagtaatgtggtaaagtggttctggaaa
gccgtggagtcgtttgatgaggagcgcagagccagacttctgcagtttgtcaccggctca
tctagagtgcctctgcaaggcttcaaggccttacagggtgctgcagggcccagacagttc
accatccagcaaatcgatgccaacaccaacaacctacctaaagcccacacatgttttaac
cgcgtcgacattccaccatacgagaactacaacaaactgtatgacaagctgctgactgcc
atcgaggagacctgtggctttgcggttgaatga
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