Tachysurus fulvidraco (yellow catfish): 113634530
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Entry
113634530 CDS
T08119
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113634530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113634530
03036 Chromosome and associated proteins [BR:
tfd03036
]
113634530
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113634530
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113634530
Chromatin remodeling factors
BAF complex
113634530
PBAF complex
113634530
GBAF(ncBAF) complex
113634530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
113634530
NCBI-ProteinID:
XP_026989360
LinkDB
All DBs
Position
5:29003025..29022449
Genome browser
AA seq
1603 aa
AA seq
DB search
MSTPDPPLGPSPGPGPSPGPMMGPGPSPGSSHGMMGPSPGPSTTSGHSVPQQGAAGYTQQ
DSMHSMHKSLESLHEKNVGEESRFGQMKGVSMRAGGHAGMGPPPSPMDQHSQGYPSPLGS
SDHVSSPLPAGAPPTSGPLLSSSCTSSSPLEGTDSQPNRSGAQSNTPGTSANPTPFNQNQ
LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGQTMPSLPPGGGGGPGTGPGP
LGPNYSRGHVLSGPSVPPSGPNAVPPANGPPKTWPEGPMVNAATPSNAPQKLIPPQPTGR
PSPVPPSVPPAASPVMPPQTQSPGHPGHSAQPAPTIPVHQKHNRITPMQKPCGLDPVEIL
QEREYRLEARITHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD
AALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFK
EYHRSITGKMQKLTKAVSTYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQPLALGPDGEPL
DETSQMSDLPVKVIHVDSGKILSGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDTGSDEDE
EEEEEPQPSQAPVEEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGGAAFTCGLQSYY
SVAHAVTEKVDRQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGK
FNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGADLYRASGKFEVLDRILPKL
RATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKMFNDPESQFFIF
LLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQM
IARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAEVERLTCEEEAEK
MFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRHKKTTRKRKRDRDLDAGPST
SGTRGARDKDDDTKRQKKRGRPPAEKIAPNPPSLTKKMKKIVEAVIKYKESSNGRQLSEV
FIQLPSRKELPEYYELIRRPVDFRKIKERIRSHRYRSLNDLERDVMLLCQNAQTFNLEGS
LIYEDSIVLQSVFTSLRQKIEKEEESDGEESEEEEEEQDEGSESESRSVKVKIKLGRKER
GAERGKGRRRGGRTRAKPVVSDDDTEDEREEERSNTASDEDQG
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagatcctccgttaggcccttcccctggtcctgggccttctcctgggcca
atgatggggcctggaccatcacctggatcttcccatggcatgatgggtccaagcccggga
ccctccaccacatccggtcactctgtccctcagcaaggagccgctggttacacacagcag
gacagtatgcactccatgcacaaatctctggagagtcttcatgagaagaatgtaggagag
gaatctcgttttggtcagatgaaaggtgtgtccatgagagctggtggacatgctggcatg
gggcctccaccgagtcctatggaccaacactcccaaggctacccgtctccgctgggctcc
tcagatcacgtctccagtcctctcccagctggtgcccctcctacatctggtcctttactt
tcttcttcttgcacctcctccagtccactagagggcactgactcccagccgaaccgctct
ggggctcagagcaatacacccggaacctccgccaaccccacaccttttaaccaaaaccag
ctgcaccagcttagggcacaaatcatggcctacaagatgctggcacgtggacagcctcta
cccgaccatctacagatggcagtacagggcaagaggcccatgccaggcatgcagcaaggc
cagaccatgccaagtctgccccctggtggaggaggagggccaggtacaggtcctggacct
ctgggacccaactatagtcgagggcatgttttgagtggaccaagtgtgcccccatcaggc
ccaaatgccgttccccctgccaacgggccaccaaaaacctggcctgagggtcccatggtg
aacgcagccacgccttctaatgctcctcaaaagctgatacctccacaacccaccggccgg
ccatctccagtgcccccctctgtgccccctgctgcctccccggtcatgcctcctcagact
cagtctcctggacaccccgggcactcggcccagccagcgcccaccatccctgtgcatcag
aaacacaaccgaatcactcccatgcagaaaccctgcggcctggaccctgtggagatccta
caggagagagagtacaggctcgaagcacgtataacacaccgcatccaggagctagagaat
cttccaggctcactagctggagacctgcgtacgaaagccaccatcgagctcaaagctctg
cgactgctcaactttcagagacagctgcgccaagaggtggtggtgtgtatgaggcgtgac
gcggctctcgagacggctctggatgcgaaggcttataagcgcagtaagagacaatccttg
cgagaggctcgaatcacagagaaactggagaaacagcaaaagatcgaacaggaacgcaaa
cgacggcagaaacatcaggaatatctaaacagcatcctccagcatgccaaagactttaaa
gaataccatcgttccatcactggaaagatgcagaagctgaccaaagctgtgtctacgtac
cacgccaacacagagcgagagcagaagaaagagaatgaacgcatcgagaaggagaggatg
aggagactgatggcagaagatgaggagggatacaggaagctgatcgatcagaagaaggat
aagcggctggcgtacctgttgcagcagactgatgagtacgtggccaacctgaccgagctg
gttcgggctcacaaggcggcccaggctctcaaagagaagaagaagaaaaagaaaaagaag
aagaagctggagaacgccgaagggcagccactcgctttgggaccagatggagagccgctg
gacgagacgagtcagatgagtgacctgcctgtgaaggtgatccacgtggacagcgggaag
atcctgagcggagtggacgctcccaaagcgggacagctggatacctggctggagatgaac
cctggctatgaggtagcgccgagatcagacagcgaggacacaggttctgatgaggacgag
gaggaagaggaagagccccaaccatcacaggctccagtggaagagaagaaaaagattcca
gatccagacagtgaggatgtttcagaagtagacgctcgtcacatcattgagcatgccaag
caggatgtagatgatgaatatggtggtgcagcgttcacatgcggcctgcagtcgtactac
tcagtcgctcacgcggtcaccgaaaaggtcgatagacagtcgtccttgttgattaacggg
cagctcaaacagtatcagataaaaggtttagagtggctggtgtctctgtacaataataat
ctgaatggaatcctagctgatgagatgggtttaggaaaaaccatccagactatcgcgctc
atcacctacctcatggagtacaaacgcctcaacggtccatatctcatcatcgtaccgctt
tcaactctttctaactgggtctacgagtttgacaaatgggccccgtctgtagtgaaggtc
tcctacaagggatctcctgcagccagacgggcgtttgttcctcaactccgcagtggaaaa
ttcaacgttcttctcaccacctatgagtacatcattaaagacaagcaaatattggcaaag
atacgctggaagtatatgatcgtggatgagggccaccggatgaagaaccatcactgtaag
ctgactcaggtgctgaacacacactacctggctccgaggcgcgtactgctgacagggaca
ccactgcagaacaagctgcctgagctctgggcactgctcaacttcctgttgccaaccatc
ttcaagagctgcagcaccttcgaacagtggttcaacgccccttttgccatgacaggagag
aaggtggacctgaacgaagaggagaccatcctgatcattcgccgtctccacaaagtgctc
cgccccttcctgttacgtaggctgaagaaagaggtggaagctcagctacctgagaaggtg
gaatatgtgatcaagtgcgatatgtcagcactgcagagggttctttacagacacatgcag
gccaaaggggttctgctgaccgatggatctgaaaaagacaagaagggtaaaggcggcact
aaaactctgatgaacacaatcatgcagttgaggaagatttgtaatcatccctacatgttc
cagcagatcgaggagtccttttctgagcacttggggttttctggtggtatagtacaaggc
gctgacctgtatcgagcttctggaaagtttgaagtgctggaccggatccttcccaaactc
cgagcgaccaatcacaaagtgctgctcttctgccagatgacatcactgatgaccatcatg
gaggactattttgcgtatcgcaactttaaatacctccgtctggatggtaccactaaggca
gaggatcgtggcatgctgctgaagatgtttaatgatccagagtcacagttcttcatcttc
ctgctgagcaccagggcagggggtcttggtcttaacctgcagagtgcggacacggtggtc
atctttgacagtgattggaaccctcaccaggacctgcaggctcaggaccgggctcatcgt
atcgggcagcagaacgaggtacgggtgttacgcttgtgcactgtgaacagtgttgaagag
aaaatcctcgctgctgccaagtacaagctcaacgtggaccagaaggtcatccaagcaggc
atgtttgaccagaaatcttccagtcacgagcgccgtgcgttcctgcaggccatcctggag
cacgaggagcaggacgaggaagaggatgaagttccagacgatgaaactgtgaatcagatg
atagcaaggagtgaagaggagtttgatcacttcatgcgtatggatttggaccggcgtcgt
gaagaggcacgaaaccccaagcgcaggcctcggctcatggaggaagacgagttgccgact
tggatcatgaaggacgacgctgaggttgagcggctcacctgtgaggaggaggcagagaag
atgtttggccgcggctcacgtcagagaaaggaagtcgactacagtgactcgctcactgag
aaacagtggctcaaggctatagaggaaggcacactggacgagatcgaggaggaagtgcgc
cacaagaagacgacccgaaagaggaaacgcgatcgggatcttgacgctggtccgtctaca
tcagggacacgaggagcgagagacaaagatgacgacactaaaagacagaagaagcgtggt
cgacctccagcagagaagattgccccaaacccaccaagcctcaccaagaagatgaagaag
attgtcgaagctgttattaaatacaaagagagcagtaatggccggcagctgagcgaagtc
ttcatccagctcccgtctcgtaaagagcttcctgagtattacgagctgatccgcagacct
gtcgactttcgcaagatcaaggagcgtattcgcagccaccgctatcgcagtctgaatgac
ctggagagagacgtgatgctgctgtgtcagaatgctcagacctttaacctggagggctca
ttgatttacgaggactccatcgtgctgcagtcagtgttcaccagcctgcgacaaaagatc
gagaaagaagaggaaagtgacggagaggagagtgaggaagaggaggaggaacaggacgaa
ggctcggagtctgagtctcgctcagtgaaggtgaagatcaaactgggccggaaagaacgc
ggtgccgagagaggaaaaggcaggaggaggggaggaagaaccagagccaaacctgtcgtc
agtgatgatgacaccgaggacgaacgagaggaggagcgctctaacactgccagtgatgaa
gaccagggatga
DBGET
integrated database retrieval system
