Tachysurus fulvidraco (yellow catfish): 113634734
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Entry
113634734 CDS
T08119
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113634734 (irx1b)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113634734 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
113634734
NCBI-ProteinID:
XP_026989676
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All DBs
Position
7:complement(6230222..6234431)
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AA seq
418 aa
AA seq
DB search
MSFPQLGFPQVYGVERASPPRDGGSESGSGITGSPASSAAALAPLLGVYAHPWSAHRYGA
FMPYSSAEAALLNHMGTQYELKENPGAHPAGFAVHTAPGFYPYSQYQYGDPARAKSATRE
TTSTLKAWLQEHKKNPYPTKGEKIMLAIVTKMTLTQVSTWFANARRRLKKENKVTWGRSA
EDVDGYDSDRDDDDESAHKHEREEEIDLETVDTDEAEEDHVDVSKEQSEVKAREGHQSDT
ESGSAEALNSPVGSVPGSKDASAGKSVPADVSPGCQRPVNSKPKIWSLAETATSPDSCQK
ASSVSPALTAHPAFLSTNGIYTCQIGKLNSWTGGAFLGAGPLIGVRSLMGVSPSSHYITS
SAQSESPTHSLSLSPQHNADQEHIQRTESPALPLRPSFPVIHDRSHHETAQRALKTVS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggcttcccgcaggtatacggtgtggagagagcgtctccgccg
cgggatggcggctcagagagcggcagcggaataacggggagtcccgcgagctctgcggcg
gcgcttgcgccacttcttggcgtgtacgcgcatccgtggagtgcgcaccggtacggagcc
ttcatgccgtacagcagcgccgaagctgcgctcctcaaccacatgggcacccagtacgag
ttgaaggagaacccaggtgctcacccagccggattcgcggtgcacaccgcccctggtttc
tacccgtacagccagtaccagtacggggaccccgcgcgcgccaaaagcgccacacgcgag
accacgagcacgctgaaagcctggctgcaggagcacaagaagaacccgtatcccactaaa
ggcgaaaagatcatgctggccatcgtgaccaaaatgaccctgactcaggtgagcacgtgg
tttgccaacgcgcgccgccgcctcaagaaggagaacaaggtgacatggggacgcagcgcc
gaggacgtagacggctacgacagcgaccgcgacgacgacgacgagagcgcgcacaagcac
gagcgagaggaggagatcgacctggagaccgtggacaccgacgaggccgaagaggaccac
gtagacgtaagcaaagagcagagcgaagtcaaagcacgggagggtcatcaaagtgacacg
gaaagcggaagcgcagaagcgttaaacagcccagtcggttccgtgcccgggagtaaagac
gcgagcgctgggaaaagtgtcccagcggacgtttctccgggatgccagaggcctgtgaac
tccaaacccaaaatctggtcgctcgcggaaacagcgacgagtcccgatagctgtcagaaa
gcgagcagtgtttctccggcactgaccgctcacccggcttttttatccactaacgggatt
tacacgtgtcagatcgggaagctgaacagctggactgggggcgcttttctcggtgcagga
cctctaatcggtgtgcgctctctaatgggagtgagtccgagcagccattacataacctca
agcgctcagagtgagagtcctacacacagcctcagcctcagtccacaacacaacgccgat
caagaacatattcagagaactgaatctccagcacttcccctgaggccatcatttccggtc
atccacgacaggtctcaccatgaaacagcacagcgagctctgaagactgtttcctga
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