Tachysurus fulvidraco (yellow catfish): 113634766
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Entry
113634766 CDS
T08119
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
tfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113634766 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
113634766 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113634766 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113634766 (gtf2h4)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113634766 (gtf2h4)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113634766 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
113634766
NCBI-ProteinID:
XP_026989719
LinkDB
All DBs
Position
7:complement(5934134..5943385)
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AA seq
471 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPDILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLNHALP
QAAVALWVKKDSQMDHDKCVSMLTGLRLWHSQQLQGGLQGIVLNPVFKDNLRIALLGGGK
PWADEGSSLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
EAGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTVQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTANSSSSSSSSSTY
STDLTLSSGTGDSGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFSNVVVAQVTRESV
QQAIANGITAQQIIHFLRTRAHPVMFKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQ
FLSQADFEVLRDRAQGLGVLVWQNPQHRVMVVTPHGHSEVRRFWKRQKSHT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgagtacaactgcagtgcaagaaccttcacgaatacctgaaggaactgagt
ccagacatcctcgacagactgtacaaccacccagctacatgtctcgctgtttacagggag
cttccatctctggcaaagaattacgtgatgcgaatgctgttcctgaatcacgccctcccg
caagcagccgtggcattgtgggtcaaaaaagacagccaaatggatcacgacaagtgtgta
tccatgctgactggactgagactgtggcacagccagcagctgcagggaggccttcagggc
atcgtgcttaaccctgtgttcaaagataacctgaggattgcactgcttggaggaggtaag
ccgtgggcagatgagggcagcagtctcggccctgatcggcatgcaagggacatagagagc
ctggatcgctacgccatggagcgttgggaggtcatcctacacttcatggtgggctccccg
agcgccgcggtcagccaggacctcgctcagcttctcatccaggccggcctcatgaagagt
gaggctggtgaagcgccgtgcatcacttcagctggctttcagtttctgctactcgacacg
gcctctcagctgtggtacttcaccctgcagtacctcaaaacagtgcagtctagagggatg
gacctcgtggagattctttccttcctgtttcagctgagtttctccaccctcggcagggac
tattctgttgaaggcatgagcgagtctctgctgacgttcctacagcacttgcgagagttc
ggcctggtttttcagagaaagaggaagtcgaggaggtactaccccactagactggccata
acgctggctgccggagtcactgccaactcttcatcttcctcttcctcctcctccacgtac
tctaccgatctgactctttcctcaggaacaggagactcgggtttcattgtggtagaaacc
aactaccgcgtgtacgcatacacaaactcggagctgcagatcgctctggttgctctcttc
agcgagatgctctatcggttttctaacgtggttgtggcgcaggtcaccagagagtctgtg
cagcaggctattgctaacggcatcacagcacaacagatcatccacttcctgaggaccaga
gcacatcctgttatgttcaaacagacgccggtacttcctccaaccatcacagatcagatc
agactgtgggagctcgaaagagatcggctgcagtttacggaaggcgtattgtacaaccag
ttcctgtcacaggctgattttgaggttctgcgcgatagagctcagggtttgggagtgttg
gtgtggcagaatccacagcacagggtcatggtggtgacgccacacggacacagcgaggtt
aggaggttctggaagagacagaagagtcacacgtag
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integrated database retrieval system
