Tachysurus fulvidraco (yellow catfish): 113634842
Help
Entry
113634842 CDS
T08119
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113634842 (nphp4)
Cilium and associated proteins [BR:
tfd03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113634842 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113634842
NCBI-ProteinID:
XP_047655868
LinkDB
All DBs
Position
14:complement(8028302..8197722)
Genome browser
AA seq
1402 aa
AA seq
DB search
MSDWKRIFDENRVIPPPSQTSRLAHGPSQAFQLVLKRLDGLQLNQVEEVRSDRLELRVTL
FDNSLHRFFGRTWKSKLHQATKQNQEQPSKVHFNEVVYFHTSLCLASLVAVVELASLSAG
TDASQTAVGQGFGILQLFSEQAQGEGRLSLFHGTPRALLHPTMRDPLQMNAVLSAIEGTQ
LLYYLQPHPALNPIMHLLPPNIMVSGHELIPGVLPPTDSTGDALHRPRLMPAFSCVLNSV
CVSLAPSVQAFEADLLERLNNDRNTTGMGAEVPSVVVQERRLHVGVHNGLGWVDGPQLMV
LETRSEGSTGLKQSSTETNSAVLMLRGNVELRMIRHPAFSLVFQLEYVFSVPIAGDKKTS
SMAMQRAVFMQCARWGVWSPFSDPDDPHQSVCVSLQGGALPNPYGLMVYTAHTQQKDAER
SVIKFKFMYNTECATSSTMLKSDSQEKPQTKVWQVTPRDESKFGLEASPLRTTRGPGLSL
SQLAVPSHFPTRSHTAGSPWQQQLPAPLALSPMPSAHQLSHVVHSPVGIAHLEVSAMERE
GMRDAPEEECDLHELTFTPVHAPVITMGTHTTGSSRTSSRGFLAHLFSSRFPEIRDELNQ
VAELMDPEEPVNFDPHREEADPLQANTLLLQFLAFSRVHQAGVNTESPSTVHFTFQLYRF
PPVTTQRLRLVAFDASSRPDYPCILSVTNKDGSIGSGPPGLHLKYRVDPAFLKPGERIWF
LRYLALHTMHIDVWDSDSLLLIGSAAVPLKHLLRQGRTAVQVIHELEVISTEYQQDASLA
RDHGGGQRAISAMSVHTIVKGRLFIRLGNIGGVVEKNPNPSVLLPPSRSHVIQPSQTPTG
FQGGSLSSNATHNLAARSTKRAQRLPDIDGELASLLQIRMKEVDSVWLQSRGETEEVRQR
KIDRMAAVRQHEGHTTYKTHEKSSYMKRKEDHSQDLRLIEAYRERCKVEGIINMLSQAIT
TTHTIYATLGTAEFFEFVLKNPFNIPQTVTIECEDPELSVIVNAEEWRYFKDMTKTCTPL
EVEMFHMKEDGSTPQVYLRPRESVHIPFKYQSFVSGHALLSQGSKTSTSLHLAQPQQSNT
VRAKSIKVFFRAADSQPLAVCQVRVEPTPHIVDQTFRFYQPELSFFKKAIRLPPAEPGTP
DAGSRLQVRCSDPNVICQVIATAPGEPQDIYLKVQGAPSPQIKTFVISVFDDPWLASPTQ
TWQVYMHYLQKMDVSCVCGSLSWHSLVLRGTQSIRKVKCYTSHPLELQVDPEGVFALPAL
CVQDIRLGVKALHSGNCFRYLNVVDVDTRQLVASWLLCLTCRQPVISRAFEIQVPVEGGR
GSNKKISFTNPYPANKGFRLCSDHPDLLQFKEEKFQVEGGASYNIGLRFAPSQSAGTEEI
LIFINDLEDKNEETYCIKVVYR
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactggaagcgcattttcgatgaaaaccgagtgattcctcctccaagccaaaca
tcccggctagcacatggcccgagccaggctttccaacttgtgcttaaacgactggacgga
cttcaattaaaccaggttgaggaagtgagatctgacaggcttgagctgcgtgtcactctg
tttgacaacagtcttcatcgtttctttggaaggacatggaaaagcaaacttcatcaggcc
actaagcaaaatcaggaacaacccagcaaagtgcattttaatgaggttgtatatttccat
acgtcgctgtgtttggcttcattggtggctgttgtagaactggcttcgctctcagctggg
acagacgcttcccagactgcagtggggcagggctttggtatcctgcagctcttttctgaa
caagcgcagggagagggcaggttgagtctgttccatggtactcctcgtgctctgctacac
ccgacaatgagggacccactgcagatgaatgcagtgttgtcagcgatagaaggaactcag
ctgctatattatctccagccgcatcctgccctcaatcccatcatgcacctactcccaccc
aatatcatggtctctggccatgagctcatccctggagtccttcctccaactgacagcaca
ggagatgctctgcacagacctcggctgatgccagcattctcatgcgtgctgaatagtgtg
tgtgtgtctctcgcgccctccgtccaggccttcgaggcagatttgttagagaggctcaac
aatgatcgcaacaccacgggaatgggtgcagaggtgccttcagtggtggtgcaggagaga
aggctgcacgttggtgtccataacggcctgggctgggtggatggacctcagttgatggtg
ctagagaccaggtctgaaggaagcactggcctcaaacagagctcgacagaaacaaacagc
gctgtcctgatgctacgtggtaacgtggagctgagaatgataaggcacccagccttcagc
ttggtcttccagctggaatatgtcttctctgttcccattgcaggagacaagaagacgtcc
tccatggccatgcagcgggcagtatttatgcagtgtgcgcgctggggtgtgtggagtcct
ttctctgatcctgatgaccctcatcaaagtgtgtgtgttagcctgcagggcggcgcccta
ccaaacccctatggacttatggtttacacagcacacacacagcagaaagatgctgaaaga
agtgtcatcaaattcaagtttatgtacaataccgaatgtgccacatccagtacgatgtta
aaatcagactcccaggaaaagcctcagactaaggtgtggcaggtcacaccccgtgatgaa
agcaagtttggacttgaagcttcaccactgcgcaccactcgtggtcccggactctcgctc
tctcagctggctgtgccttcgcacttcccaactcggagccacacggcagggtcgccatgg
caacagcagcttcccgctccactcgctctctccccgatgccgtcggcccaccagctgtca
cacgtcgtacattcacctgtaggcatagcccaccttgaagtcagtgcgatggagagagag
ggaatgagggatgccccagaggaagagtgtgatctacatgaactgaccttcacccctgtc
catgctcctgtcatcacaatgggaacacacacaactggctctagcaggacgagttctcga
ggtttcctcgctcatctcttctcttcccgcttccctgaaatccgtgacgaactcaaccaa
gtggctgagcttatggaccctgaggagccggtgaactttgacccccacagagaagaggca
gatccattgcaggccaatacactccttctccagttcctggcttttagcagggtccatcag
gctggagtgaatacggaatcgccgagcaccgtacattttacctttcagctgtaccgcttc
cctcccgtcaccacacaacgcctcaggcttgtggctttcgatgccagttcgagacctgat
tacccctgcattctgtctgttactaacaaggatggcagcattggatcaggtcctcccgga
ctgcacttgaagtatcgtgtcgatcctgccttcctcaagcctggcgagcgtatatggttc
ctccgctacctggcactgcacacaatgcacatagacgtgtgggacagcgactcgctactg
ctcatcggctctgccgccgttccgctcaagcatctgttgcgtcagggtcgaaccgctgtg
caggtgattcatgagctggaggtcattagcactgagtaccagcaggatgccagtctggca
agagatcatggaggtgggcagagggccatatctgccatgagtgtccacaccattgtcaaa
ggcaggctgtttatccgactcggcaacatcggtggtgtggtggagaaaaacccaaacccg
tctgttcttctccctccatctcgctctcatgtcattcagcccagccagactcccacaggc
tttcaaggaggcagtctgtcctcaaacgccacccacaatctcgccgcacggagcacaaag
cgggcccagcgtttgccagatatcgatggcgagttggctagtctcctgcagattcggatg
aaagaagtggatagtgtctggttgcagagtcgaggtgaaaccgaggaagtacgtcagagg
aagattgacaggatggcagctgtccgtcaacatgaaggacacaccacatacaaaacacat
gagaaatccagctacatgaagagaaaggaggatcattctcaggacctgcgattaatagag
gcctatcgagagcgctgcaaagtggagggaatcattaatatgctcagccaagcaatcacc
accacacacacaatctacgctacgctcggcactgccgaattctttgagtttgtgcttaag
aacccttttaacattcctcagacggtcacaattgagtgtgaagaccctgagcttagtgtt
atagtgaacgctgaggaatggaggtattttaaagacatgaccaagacatgcacgccattg
gaggtggagatgtttcacatgaaggaagacggctcgacacctcaggtgtacttgcggccc
agagagagcgtccacatccctttcaaataccaaagctttgtctctgggcatgcactgctt
tctcagggctcaaagacttccactagtcttcatctcgctcagccccagcagtctaacaca
gtgagggctaaatccatcaaggtgtttttccgagcagcggacagtcagccgctggccgtc
tgccaggtgagagtggagccgactccccacatcgtcgaccagacctttcgcttctatcag
cccgagctctccttctttaagaaagccatccggctgcctcctgctgaacctggcacacca
gatgctggttccaggctccaggtgcgctgcagtgaccccaatgtgatctgccaggtcatc
gccacggccccaggagaacctcaggacatttatctgaaagtgcaaggagctcccagtcca
cagattaagacattcgtcatcagcgtattcgatgatccctggctggcttctcccactcaa
acgtggcaggtgtacatgcattacctacaaaaaatggacgttagctgtgtgtgtggttct
ctcagctggcactccctggtactgcgtggcacacagagcatccgcaaggtcaagtgctac
acctcccaccctctggagctgcaggtggacccagagggagtgtttgcgcttcctgctctg
tgtgtgcaggacattaggctgggagtgaaggctctgcactctgggaactgtttccgctac
cttaatgtggtggatgtggacacgaggcagctggtggcatcctggcttctgtgcctcacc
tgcaggcagcctgttatttcacgggcctttgagatccaagtgcctgtagaaggtggacga
ggcagcaataagaagatcagcttcaccaatccctatcctgctaataaagggttcaggctg
tgctcggaccatccagacctgctgcagttcaaagaggaaaagtttcaggttgaaggaggt
gcgagctacaacatcgggttgcgttttgctcccagtcagagcgcaggtaccgaggagatc
ctcatcttcatcaatgacctggaggataaaaacgaggagacatactgcatcaaagttgtc
tacagataa
DBGET
integrated database retrieval system