Tachysurus fulvidraco (yellow catfish): 113634852
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Entry
113634852 CDS
T08119
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113634852 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113634852 (xpc)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113634852 (xpc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
113634852
NCBI-ProteinID:
XP_026989837
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Position
14:complement(7577361..7588119)
Genome browser
AA seq
904 aa
AA seq
DB search
MAKHKHRAGAVVTEKERTKEKTRCVKKRKAATKTPGIKDKGTRAKNIAKSTKPRGQASKK
AHKPTDGQKSKYFSEPLKEEPEDFEDSTMSLPESSVLKSTDYKIKEEKKENESEKSDEDE
DWEEVEELAGPLGPAVEDQEPAVPSQPVEIEIETTEARHKRQKKEKQKAEFETYLRRMMK
RFNKDIQEDTHKVHLLCLLASGLFRNRMCCEPDLLAITLSLIPAHFSVIIKKRINTVFLE
SLLKWFKETFTLNRALPEEKDLGLRELLERRLGSLSARDHQEMTYLFLLVLRSLHIYCRL
VLSLQPLPFKPPTKKGKAETSSSPPSKEKSNEADKKPPEPKVSTGSKRPSASSTGGQPKR
GGKRQKRNVEDGGDKEKEAGVGQRPKNTKRRSTASKVSYKEDSSEGEEELSEEDEFHLSS
EDDSDNSDCGGKKSNKNSKAKGKGKSPAPRRSSKIKKRTKEEEEEEEEEDLEEELEWKKQ
RGKRRQGKGDDEWIEVYLKGAKRWICIDVDQGVGQPELCSNQATHPITYVVGVDEHGYLR
DVSSRYDPTWLTASRKRRIDSEWWEETLRFYESPDSKQKKEEDEELQEKLMGQPLPKAIS
EYKNHPLYALERHMLKYEALYPSTATILGYCRGEAVYSRDCVHTLHSRDTWLKQARTVRL
GEKPYKMVKGFSNRSRKVRMLSENKDEKDLPLFGPWQTEEYQPPVAINGKIPRNDFGNVY
MFQPCMLPVGCVHLHLPNLNRVARKLNLDCATAVTGFDFHGGYSHAVTDGYIVCKEHEEI
LKAAWENEQEIQKKKEQEKREKRALTNWKLLVKGLLIKERLQQRYGQQGMAKDTGIAKGG
EEAAEGFSSGEEDEGGAQTAPPSLTVSWPQNRQEEPEEGGAKKSVSKRERRGQQKHLFPF
EKRV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacataaacacagggcaggtgctgttgtgactgaaaaggagcgcacaaaggag
aagactcgttgtgttaagaagagaaaagctgctacaaaaacgccgggcatcaaagacaag
ggtaccagagccaaaaatattgccaagtccaccaagcccagaggccaagcatcaaaaaag
gcacataagccaacggatggacagaagagcaaatacttcagtgagccattaaaggaagag
cctgaggactttgaagattcaaccatgtcccttccagagagttctgtgctaaaaagcacc
gattacaagataaaagaagagaaaaaagaaaatgagagtgaaaagagtgatgaagatgag
gattgggaggaagtggaagaactggcaggaccattaggaccagcagtggaagaccaagaa
cctgcagttccttctcagcctgtggagattgagattgagacaactgaggccagacacaaa
agacagaaaaaggagaagcagaaagctgagtttgagacttacctgcgcagaatgatgaaa
cgtttcaacaaggatatacaggaggatacacacaaggtccatctgttatgtttattggct
agcggactgttccggaaccgcatgtgctgtgagcctgacctactggccatcaccttgtcc
ttaattcctgcccacttctctgtgattattaaaaaacgtatcaacactgtctttctggaa
agtcttctgaagtggtttaaagagacgttcacactaaaccgtgccctccctgaagagaag
gacctgggactgcgagagctgctggagagacgtttgggaagtctgtcagcacgtgaccat
caggagatgacctatctgttcctgctggtgctgagatcactgcacatctactgtcgattg
gtgctgtcactacagccattacccttcaagccaccaacaaaaaagggaaaggcagaaacc
tccagcagtcctccttctaaagagaagtcaaacgaagctgataaaaagccaccagaaccc
aaagtttccacagggtccaaacgcccatctgcttccagtactggggggcaaccgaagagg
ggaggaaagagacagaaaaggaatgttgaggatggaggtgacaaggagaaagaagcagga
gtgggacaaaggccaaaaaacaccaaaagaaggagtactgcatcaaaagtgtcatataaa
gaagatagcagtgagggggaagaggagcttagtgaagaggatgagtttcatctgtccagc
gaggatgacagcgataattccgattgtggtggaaaaaagtccaacaagaattcaaaggct
aaaggaaagggcaaaagtcctgctccacgacgatccagcaagatcaagaagagaacgaag
gaggaggaggaggaagaagaagaagaagacctagaggaggagctagaatggaaaaagcag
cgagggaaaaggaggcaggggaaaggagatgatgaatggatagaggtgtacctgaaaggg
gcaaagagatggatatgtattgatgttgatcaaggggtggggcaaccagaactctgctct
aatcaggccactcatccaattacatatgtagtgggtgtagatgaacacggttacctgaga
gacgtgagcagcagatacgaccctacctggctcacagcatcacggaaacgacgcatcgac
tcagagtggtgggaggagacgttgcgcttttacgagtctcccgattctaaacaaaagaag
gaagaagatgaagagctgcaggaaaagttgatgggtcagccattgccaaaagccatatct
gagtacaagaaccatcctctgtatgcactggagaggcacatgctgaagtacgaggccctg
tacccttccactgctaccattttgggctactgtcgaggagaagctgtctattcacgggat
tgtgttcacacactgcattcgagagacacatggttaaagcaagcgcgcactgtacgactc
ggggagaagccttacaagatggtaaagggattctcaaaccggtcccggaaagtcaggatg
ttgtctgagaacaaagatgaaaaggacctacccctgttcggcccctggcagaccgaggag
tatcagcccccagtagccatcaacggcaagattccacgtaacgactttggaaatgtgtac
atgtttcaaccgtgtatgttgccagtgggatgtgtgcacctacatctgcctaatctgaac
agagtggctcgaaaactcaacctggactgtgctactgccgtaacaggcttcgatttccat
ggaggatattcacatgctgtaactgacggctacattgtgtgtaaggaacatgaagagatt
ctgaaagctgcctgggaaaacgagcaagagattcaaaagaagaaggaacaagagaagcgt
gagaagcgagcgctgactaactggaagctgctggtgaaagggctgctgataaaagagcgg
ttgcagcagcgttacggacagcagggcatggccaaggacacgggcattgcaaaaggcgga
gaagaagcagcagagggattctcatctggagaggaggatgaaggtggagctcaaacggct
ccaccatctctgaccgtttcatggccacagaataggcaagaggagccggaagaaggagga
gctaaaaagtctgtcagtaagagggagagacgtggccagcagaaacatctcttccctttt
gaaaaacgtgtgtga
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