Tachysurus fulvidraco (yellow catfish): 113634912
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Entry
113634912 CDS
T08119
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04068
FoxO signaling pathway
tfd04110
Cell cycle
tfd04120
Ubiquitin mediated proteolysis
tfd04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113634912 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
113634912 (skp2)
04150 mTOR signaling pathway
113634912 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113634912 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113634912 (skp2)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113634912 (skp2)
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
DUF7885
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_FBXL18
LRR_4
LRR_8
LARA_dom
Motif
Other DBs
NCBI-GeneID:
113634912
NCBI-ProteinID:
XP_026989898
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Position
21:9182052..9189589
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AA seq
411 aa
AA seq
DB search
MSAERPLQELPCLNENLDGSLLCMSQSKVKKRPCAYGDGLQAENTPHELIQHWSPPRKQP
RPCAKGKENGFVLARRPRRSRDTTGVRCWDSLPDELLLGIFSCLSLQDLLRTSRVCKRWH
RLAFDESLWHSADLVGKAQLNGELGQVLTAGVSRLRCPHSCIGKPHFKNTQLLRVQHLDL
SSCTVQAPVLEDILSRCRRLQNLSLEGLVLSDSILRSLSENTELVRLNLCGCSGFSADSL
TEMLQSCTKLEELNVSWCDFSSEHVQAVVNNVPSTITQLNISGYRQNLTMDNVKVLVERC
PNLTHLDLSDSVLVTTDSFPFLQQLSSLSHLALSRCYQIHPAALIEFEKFVTLQTLEVFG
LIQDSSLPILTKGLPRVQINNQPFSGVARPTTAARKDRTLWGMHCRLVYKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgagaggcctctccaggagttgccctgtctgaatgagaatctcgatggctcc
ttgctgtgcatgtcgcagtccaaagtgaagaaaaggccgtgcgcatatggagacggactg
caggctgaaaacactcctcacgagcttatccaacactggtctcctccccgtaaacagcca
cggccctgtgccaagggcaaagagaacggctttgttctagccagacgtcccagaaggagc
agagacacgacaggtgttcggtgttgggactccctcccagatgagctgctgttggggatt
ttctcttgtctctcgctgcaagaccttctcaggacgtctcgagtctgcaagcgctggcat
cgactggcgtttgatgagtcattgtggcacagcgctgacctggtgggaaaagcacagctg
aacggcgagctgggtcaggtgctcacagcaggagtgtcgcggctgcgctgtccacattcc
tgcataggcaaaccccattttaagaacacacaacttctgcgtgtccagcatttggacctg
tccagctgcactgtgcaggcgcctgtgctggaggacatcctgtcacgctgcagacggctg
cagaacctcagcttggagggactcgtgctctctgactccatcctccgatctctgagcgag
aacacagagctggtgcggctgaacctgtgcggttgtagcggtttctctgctgactctctg
actgaaatgcttcaatcctgcaccaagcttgaggaactgaacgtgtcatggtgtgacttc
agcagtgagcacgttcaggcagtcgttaacaacgtcccctccaccatcactcagctcaac
atcagtggctacagacaaaaccttaccatggacaacgtgaaggtgctggtggaaagatgt
ccgaatctcacacacttggatttgagtgacagcgtcctcgtgaccacagacagtttcccc
ttcctgcagcagctttcgtcactgagccatttagcgctgagtcgctgttaccagattcac
ccagctgccctcatagagtttgagaagtttgtgactctgcagaccctggaggtgttcggt
ctaatacaggacagctcactgcccattctgactaaagggttgccacgggtacagatcaac
aaccagccgttctccggtgtggctcgtcccaccacggccgcacgaaaagaccgtacactg
tggggaatgcactgtcgactggtgtataaaccctaa
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