Tachysurus fulvidraco (yellow catfish): 113634952
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Entry
113634952 CDS
T08119
Symbol
nectin1a
Name
(RefSeq) nectin cell adhesion molecule 1a isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03266
Virion - Herpesvirus
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
tfd04520
Adherens junction
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
113634952 (nectin1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113634952 (nectin1a)
04517 IgSF CAM signaling
113634952 (nectin1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113634952 (nectin1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113634952 (nectin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113634952 (nectin1a)
04090 CD molecules [BR:
tfd04090
]
113634952 (nectin1a)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Nectin family
113634952 (nectin1a)
CD molecules [BR:
tfd04090
]
Proteins
113634952 (nectin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Sema4F_C
Ig_PVRIG
Ig_6
Ig_VWDE
Motif
Other DBs
NCBI-GeneID:
113634952
NCBI-ProteinID:
XP_026989958
LinkDB
All DBs
Position
21:8936043..8967513
Genome browser
AA seq
505 aa
AA seq
DB search
MLTVVFQFPLIAVLAISGVSGQTVHTDSDRSGYVGTQVELRCHFANSKPPVKISQVTWQK
SSNGTKQNVAIANPALGVSVLPAFKDRVRFKNPAVRLKATSLEDTTIVFNNLKLADEATY
ICEYTTFPAGNRESMVNLTVNARPMIQMSLSTPTIVAGSKDMKMTVATCVSANGKPPAVI
TWDTELDGETKTEEIRNADGTITVRSDYIMTPSREAHEQRLTCISTYNNDQQTENVILNI
QYEPEVSIEGFDGNWYINRENVQLTCLADSNPAISTFQWRLSGLESGKDVQILNGSMPST
AEQRGETLIFKGPVTYEMAGTYTCDATNSIGTGSASVEVIITESPSSTNAEQQRAGAAIG
GAVVCGTVLLAAIILLVVFFHRQRRTFKGDYSTKKQVLANGFGKASDLSSCPSLPQSLTY
PEDLNYPEDEKKPELYGPSFLGESVPEFHNHPSNSMTTYSPAEENKRLRFNEQSYRDGFG
SELEVSVDMVPQKDGSVISKEEWYV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttaactgtggtgttccagtttcctctcatcgccgttcttgcaatatcaggtgttagc
ggtcagactgttcacacggacagcgaccgctcaggctatgtgggcactcaggtggagctg
cgttgtcattttgccaacagtaaaccaccggtgaagatctcccaggtcacctggcagaag
tcttccaatggcaccaagcagaacgtggccatcgccaatcccgctctgggagtgtctgtg
ctcccagcttttaaagaccgggtgaggtttaagaacccagcggttcgccttaaagcaact
tcactggaggacacgactatcgtcttcaataacctgaaattggccgatgaggccacgtac
atctgtgaatacaccacctttcctgcgggtaacagggagagcatggtcaatctcaccgtt
aatgctcgaccaatgatccagatgagcctgtccacaccaaccatagtggcaggatcaaaa
gatatgaaaatgaccgtagcaacatgtgtctcagctaatgggaagcctcctgctgtgatc
acatgggacacagagttagacggcgaaacaaagactgaggagatcaggaatgcagacggg
acgataacagtgcgcagcgattacatcatgacacccagtcgagaagcacatgagcagcga
cttacctgcatctctacctacaataacgatcagcaaacagaaaacgttattctcaacata
cagtatgagccagaggtgagcattgagggttttgatggaaactggtatataaatcgagag
aacgttcagctaacttgcttggccgattccaatccagccatttctacgtttcagtggaga
ttatcaggtctggaaagtggaaaagacgtccaaattctaaacggatccatgccgagtaca
gccgagcaacgtggagagacactaatctttaaaggccctgtaacgtatgaaatggcagga
acatacacgtgtgatgccacgaacagtatcggtacaggctcagcatcagtcgaggtgatt
ataacagagtcccctagctcaacaaatgctgagcaacagcgagcaggtgccgctattggt
ggagcagttgtgtgtggtacagtgctgctggcagccattatattgttggtggtcttcttt
catcggcaaaggcgcacgtttaaaggagattacagcaccaaaaaacaggttctggccaac
ggctttggcaaagcaagcgacttgtcttcatgcccctctctgcctcagagcctgacctat
cccgaagatctgaactaccctgaggatgagaagaagcctgaactttatggccctagtttc
ttaggtgaaagtgttccagagttccataaccatccttccaacagcatgacgacctacagt
ccagcggaggaaaacaagaggttgagatttaatgaacagagctacagggatggctttggg
tctgaattggaagtctctgtggatatggttcctcaaaaagatggttctgtcatctctaag
gaggagtggtatgtgtga
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