Tachysurus fulvidraco (yellow catfish): 113635180
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Entry
113635180 CDS
T08119
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113635180
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113635180
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_2
TPR_8
TPR_10
TPR_14
TPR_NPHP3
TPR_MalT
SH3_1
ARM_TT21_4th
TPR_7
SH3_9
TPR_9
SH3_2
TPR_16
Motif
Other DBs
NCBI-GeneID:
113635180
NCBI-ProteinID:
XP_026990266
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All DBs
Position
1:complement(33294692..33311136)
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AA seq
1328 aa
AA seq
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MKTTLMLTMDQQNMASLRVNSGCQTFGPYRHELSVEHNSNDLDNKDMFKSLDIENKPLRT
SGSVKGTPAVSEDKIPTVLGLQLAIAQGPDRLPADKNTQEVLCGKLRVLEADLCNITSLL
SEFSAHLVSINSEERTIFITFKSFEEIWKFTTYHRMGFLRQCLGNVLLNQEFWLNALDQE
GSGIEVSFNEEALNQMYLGFLMQEGSFFGSCTVNQMFDSSTSGSDLYLEKGDIALFEPPF
LGSGWTVLSLADGSRGTKARPALEPVIPFHEWFLKSCPEWVLVGSGKTCSNVPFQIDVGI
CEATEVYDGNGPDELSFEAGDRIIIKGLLVNCFEWFMGKLERTGDVGLVKTSLVKATDSL
SESDEIFMKEENKNIFKLEQETIKKETIAFLKKTCQSNLTTVYKLDSANARSIEDGPSNG
EYADIKINITSILGEIREHLQNEQTQDSERLQTDEQIGSTASPNEIRYFTVCSEQDGAGP
DGYYSLLSFLSSRDHQPEFQLLYAAYPEFLQLHFQGHSDEEELVAYLGVAREIARKKRMS
WAQSRICFLLGQLCAGRSKFSQARVYYEEALSIPRDYFTDIYLLSAIYSNLALIYLTQKN
AEKYLALSERFAALLLADCNYLSGTEDPEVLTYALKKAVLSQNKSAEARVCFLLSKFYLK
LEEGMNAVPFIERLQILADEMPGTCDKMQSHGFLLLARLYSDYGLLHLAESSAQQACQQV
SSSVTDCFCSISLLLENARELYGVDIPAQVVPCLTRAAALESFDMEPSLSHAYALCLSWL
FHKHGMPKRAVQYMCDFLNHSSATVLSHSDASAALIWLAWLYICNLQPHSALDVLDSVLS
SLPEHCTTRLEGVIYNMRGITLRHAGDVKQAAENFRAAIDVCEEFEDRCNWAIALANLGF
LNLQANVKRVAEEQLTQAIELFCELEDEDHELNFVVVLLALGKFYVSQGFCEKGKVYYEW
ALLTSIFYDNSESQLQATRHLCMLYSEACPDEAQCIIYNEHQLNLLQQTGDRTLEAEILE
KISLLYLSLGTEKANRCALDYTKRSIGIYIDMGTKRKEAHGWLQAGKIYHILKQTELVDL
YVQVAQDIALSTGDTLFIVELLEVAGDMFYNSTQDREKAVCFYRDRALPIAVKTSSVRCQ
LRLCNKLAELLLHLGQYQEALEYAQSALEISVNLADHLNVRVAFHRLATLYHCLSQFELA
EHHFLKALSLCPSPMQFDEEALYYVKVYQTLGDIIFHDLKDPFDAAGYYHLALAAAMDLG
NKKSQLELCTRLATIYHNFLMDRELSLHFYQRARAFAADLNIRRINLSPDQCFRTTSQYR
ITALQETS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagactactttgatgttgactatggatcagcagaacatggcgagtttaagggtgaac
tcgggatgccaaacatttggaccataccgacatgaattgtctgtggagcacaacagcaat
gatctggataataaagacatgtttaaaagccttgacatagaaaataagcccttaagaaca
tcagggagtgtaaaggggaccccagcagtttctgaagacaaaatccctacagtgttgggg
cttcagctggcaatagcacaaggtccggaccggcttcctgctgacaagaacacacaggaa
gttctgtgcgggaaactgcgtgtgctggaggctgacctctgcaatattacatccttgctc
tcggaattctctgctcatctggtgtccatcaacagtgaggaaagaaccatattcatcact
tttaaatcatttgaagaaatatggaagttcaccacataccacagaatgggtttcctacgt
cagtgtttggggaatgttcttttgaaccaagaattctggcttaatgctttagaccaggaa
ggctcaggaattgaggtgtcatttaatgaggaggctcttaatcagatgtacttaggcttt
ctgatgcaagaaggctcattttttgggagttgcacagtgaatcagatgtttgacagctcc
acatcaggcagtgatctttatcttgagaaaggtgatattgctctgtttgagcctccgttc
ctaggctcgggctggactgtgctatctctggcagacggatcaagagggactaaagctcgg
ccagcactggaacctgtcatcccatttcatgagtggtttctgaagtcctgtcctgaatgg
gttttggtaggcagtggaaaaacatgctcaaatgtcccatttcaaattgatgtaggtatc
tgtgaggctacagaggtgtatgatggtaatggccccgatgagctgagttttgaggctggt
gatcgcattatcatcaaaggcctactagtaaactgttttgagtggttcatgggcaagctg
gagaggactggtgatgtaggacttgtgaaaacaagccttgtaaaagcaacggattctctt
tctgaatctgatgaaatctttatgaaagaagaaaacaagaacattttcaaactggaacaa
gagacgattaaaaaagaaactattgcttttttaaagaaaacttgccaaagcaatcttact
acagtctacaaacttgattcagcaaatgcaaggtcaattgaagatggacccagcaacggt
gaatatgcagacataaaaataaatatcaccagtattttgggtgaaataagggaacatctt
caaaatgagcagacacaagacagtgagaggctccaaacagatgagcagattggatccaca
gcgtcacccaacgaaatccgttattttactgtttgttcagaacaggatggtgccggtcca
gatggatactattcccttctgtcctttttaagcagcagggatcatcagcctgagtttcag
cttctctatgctgcctacccagaattcctccagttgcatttccagggccatagtgatgag
gaggagctggtagcatatttaggtgtggctcgggaaatagccagaaaaaaacggatgtca
tgggcacagagcagaatctgttttctcttgggacagttgtgtgcaggaaggtcaaagttc
tcccaggctcgtgtctattatgaggaagcattaagcatacccagagactatttcacagac
atctaccttctctctgctatctactctaacctggccctcatttatctaacacaaaaaaat
gcagagaagtatcttgctctatctgaacgctttgctgctttattactggcagactgtaac
tatttatctggcacagaagaccctgaggtgttgacgtatgcactgaaaaaggcagttctg
tcccagaacaaatctgcagaagcccgcgtctgtttcctgctgtccaaattttacctgaag
cttgaagaagggatgaatgcagtgcctttcattgagcggctacagattttggcagatgag
atgcctggaacttgtgacaagatgcaaagtcatggttttttacttttagcaaggctttat
agtgactacggtcttcttcacctagctgagagctcagcacagcaagcatgtcaacaggtg
tcttcatcagtcactgattgtttctgcagcatctctttgctgttagagaatgctcgagaa
ctgtatggtgtagacatcccagcacaagttgttccatgtttgactcgagctgctgcttta
gaatcttttgacatggagcccagtctttcacatgcctatgccctgtgcctgtcttggctc
ttccacaaacatggcatgcctaaaagggcagttcagtacatgtgtgacttcctcaatcat
tcctctgctaccgtgctcagccactctgatgccagcgctgcacttatctggctggcgtgg
ttgtatatctgtaacctccaaccccacagtgctctggatgtcctggactcagtcctgtcc
tccctccccgagcactgtacaacccggctggagggtgtcatttataatatgcgtggcatc
acgttgagacatgccggtgatgtcaaacaagctgcagagaacttccgtgctgcaatcgat
gtctgtgaggagtttgaagacagatgcaactgggccatagcacttgcaaacttgggcttc
ttgaatttacaggccaatgtgaaacgggtagcagaagaacagctcacgcaggcaatagag
ctgttctgtgagctagaggatgaagatcatgagctgaactttgttgttgtgcttctagcg
cttggaaagttttatgtttcgcagggtttttgtgagaaaggaaaggtctactatgagtgg
gccctgctgacttccatcttttatgataactcagagagccagctgcaagctacccgccac
ctttgcatgctgtacagcgaagcatgtcctgatgaagctcagtgcatcatttacaatgaa
caccagctgaacctgcttcagcagacaggagacagaaccctggaggcagagatattggaa
aagatcagtctgctgtacctcagcctgggtacagagaaggcaaatagatgtgctctggac
tacaccaaaagaagcatagggatctacatcgacatggggacaaagaggaaagaggctcac
ggatggcttcaggcaggaaaaatctaccacatcctcaaacagactgagctggtggatctc
tatgtgcaggtagcgcaggacattgctttaagtacaggagacacactattcattgtggag
ctgctggaggtggcgggggacatgttctataacagcacacaggatagagagaaagctgtc
tgcttctacagagatcgagctctcccgatagcagtgaagacaagcagtgtgcgttgtcag
ctcaggttgtgtaataagctagcagagttgctgctccatttgggacagtatcaagaagct
ctggagtatgcacagtctgcattagagatcagtgtcaatctggctgaccatttgaacgtg
cgtgtggcgttccatcggctggctacgctctaccactgcctgagtcagtttgagctggct
gagcaccacttcctcaaggcgctctcactctgtccctcacccatgcagtttgatgaggaa
gctctgtactatgtcaaagtctatcaaactctaggtgacattatcttccatgatctaaag
gacccatttgatgcagcaggttattaccatcttgccctggcagctgccatggaccttggc
aataaaaagtctcagcttgagctgtgcactcgcctggccactatctaccacaacttcctc
atggatcgtgagctttccctgcacttctaccaacgggcccgtgccttcgctgctgatctc
aatatccgccgcatcaacctatcaccagaccagtgttttcgcaccacatcccaatacagg
atcaccgccttgcaggagacgagctag
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