Tachysurus fulvidraco (yellow catfish): 113635218
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Entry
113635218 CDS
T08119
Symbol
pcdh7b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113635218 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113635218 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113635218 (pcdh7b)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113635218 (pcdh7b)
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Protocadherins
113635218 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Ig_CLSTN
Ig_Cad99C_N
LYRIC
MLANA
Mid2
Motif
Other DBs
NCBI-GeneID:
113635218
NCBI-ProteinID:
XP_026990310
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All DBs
Position
1:33866006..34010411
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AA seq
1251 aa
AA seq
DB search
MRNTGTTDCLCYCFLLLQLLTQPSAKQVLRYRLAEEGPADVRVGNVASDLGIVAGSGDVT
FTLESGSEYFKIDNITGDLSTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSVRRIGSGGSTNVDSHMGKRRFDDSASRSSVFELQVADTTDGEKQPQLIIKGALDR
EQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPIL
QLKAMDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMAR
DRGQPPKTDKATMVINIKDENDNVPNIDIRKIGRIYLRDGVANVAEDVVVDTPIALVQVS
DRDKGPNGVVTCTVVGDVPFQLKPASEIEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAV
DSGSPSLSANNSLIVKVGDMNDNPPMFSKSTMEVSFPENNAPGERVLTVVALDADSGKNA
EIAYSLDSSVNGIFSIDPDTGDIRVNKILDREQTERYEFKVIAKDKGVPVLQGSATVVVL
VADKNDNEPKFMQDVFTFYLEENLQPNSPVGMVTVMDADKGHNAEMSLYIEEEEEIFSIE
NNTGTIFSTVAFDREQKTTYTFRVKAVDGGDPSRTATATVSLFVMDKNDNPPTVTFPPNS
SYTLLPPSSNMKTVVRTVMATDTDTGLNAELRYSIVGGNPFKLFEIDPATGVILLVSKLE
QKHYGLHRLVVQVNDSGVPSQSTTTLVHVYVNETLSNSTIVESKIAKSLGTPLNSDIAGD
PNYDLGKQRLSIAIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQH
DKNKKPKKDKNKRKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPG
SPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSDYS
SQTLNKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLDESETPSSKSSTGPGWEPCPS
LRMPMRGPRRMAVSVRQSIWKMEKKNNKNSRPLPDVAMTGKCTRECDEYGHSDACWMPVR
TSPERRPKATPPKLSTFNSSSAGCSGAEPATSSDPLANGEPSHLLGDRNRNLLNRKMASS
SSSSSAYDAFGSAAFSANDETSRPVEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataccggcacgacggactgcctctgctactgttttctgctactgcagctgctg
actcagccctcggctaagcaagtgctgcgctaccgcctggctgaggaaggtcccgccgat
gtgcgcgttgggaacgtggcttccgacctcggcatcgttgccggctccggggatgtgact
ttcacccttgagtctggctctgaatacttcaagattgacaacatcaccggcgacctgagc
accaatgagaggcgcattgaccgcgagaagctgcagcagtgccagatgatcttcgacgag
aatgagtgctttatagacttcgaggtgtccgtgatagggcccgcgcagagctgggtagac
ctgttcgagggcaaggttattattttggacataaacgacaacacgccgtctttcccatcg
cctgtgctcactttgtccgtggaggaaaacaggccgatcggaacgctttatctgttgccc
acggccacggacagggatttcggcagaaacgggatagagaggtacgagttgattcaggat
agcggagaaagctccgtgcgccggataggctctggagggtccactaacgtcgactctcat
atgggcaaaagaagatttgacgactctgcgagtcggagtagcgtgtttgaacttcaggtt
gcagatactacagacggagagaaacagccgcagctgattattaaaggcgcactggacaga
gaacagcgcgactcttacgagctgactctgcgcgtcagggatggcggcgatcccccgcgc
tcctctcaagcaatcctcagagtgatgattacagatgtgaatgacaacagcccgcgtttt
gagaagagcgtgtatgaagcagatctacctgagaacagctccccaggcgcccccattctc
cagcttaaggcaatggatgctgatgttggggttaacggccagattgaatatgtttttggg
gctgcaactgaatcagtgcgacgactgctgcggttagacgagagcacaggctggcttagt
gtattacataggattgatcgtgaggaagtaagtcagctgcggttcacggtcatggcccgt
gaccgtggtcagcctcccaagacagacaaggcaacaatggttatcaacattaaagatgaa
aacgacaacgtcccaaatattgacataagaaaaattggacgcatttacttgagagatggt
gtggcaaatgtagcagaagacgtagtggtagacacacctatagcattagtgcaagtgtct
gatcgcgacaagggaccgaatggtgtggtgacatgcactgtggttggtgatgtgcccttc
caactgaagcctgcgagtgagatagaaggtgacatgaacaaaaagaaatatttcctgcac
acatcagctccactcgattatgaagctgtgcaggagtacaacgttgtcatagtcgctgtg
gattcaggcagccccagtctgtctgcaaacaactccttaatagtgaaagttggagacatg
aacgacaacccacctatgtttagcaaaagcacaatggaggtctcatttccagagaacaat
gctccaggtgaacgtgtactgactgttgtggctttggatgcagacagtggtaaaaatgca
gaaatcgcatactcactggactcttctgtaaacggaatattttccattgatccagacacc
ggtgacattcgtgtcaacaaaatacttgatagagagcagacagagcgctatgagttcaaa
gtaatcgccaaagacaaaggtgtgcctgttttacagggctcagctacagtggtggtactg
gtggcagacaagaatgataatgagccaaagtttatgcaggatgtttttactttctattta
gaggagaaccttcaacccaacagccctgtaggcatggtgacagtaatggatgcagacaag
ggacataatgctgagatgagtctctatattgaggaagaggaagaaattttctccatcgag
aacaacacaggaaccattttttctactgtagcttttgaccgtgaacagaaaaccacctac
acgttccgcgttaaggctgttgatggtggagatccatctcgaacagccacggccactgtt
tcactttttgtcatggacaaaaatgataacccaccaacagtcacttttcctcctaacagc
tcatatactctgttacctccatccagcaatatgaaaacagtagtccggacagtcatggct
actgatactgacacgggcctcaatgctgaactccgctacagcatagtaggaggcaacccc
ttcaagttatttgaaattgaccctgcaactggcgttatattattagttagtaagctagaa
cagaaacactatggccttcaccgcctggtagtgcaagttaatgacagtggggttccatca
cagagcaccaccacactagtgcatgtctatgtcaatgaaacactctccaactccaccata
gttgaatccaaaattgccaagagccttggtacaccgcttaactcagatattgcaggagac
cccaattatgacttgggcaagcagcgattaagcattgctatcggagtggtgtctggcatc
atgactgtcatcctcatcatcctcattgtggtcatggctcgctactgcaggcccaagaac
aagaatgggtatgaggctggtaagaaagaccatgaggacttcttcaccccacagcaacat
gacaagaacaagaaacccaaaaaggacaagaacaaaaggaaatctaagcagcctctgtac
agcagcattgtcacagtcgaggcatcaaaacctaatggacagcgctatgatggcgtcaat
gagaaactctctgacagccctggaatggggcgttatcgctctgttaatggtgggcctgga
agcccagaccttgcccgccactacaagtccagctcacctctacctactgttcagcttcat
ccacagtcacccacagcagggaaaaagcaccaggctgttcaggatctgcctccagccaac
acgtttgtggggaccggagataacatctccattggatctgaccactgctctgattacagc
agccaaaccctgaacaaatacaacaagcagccattccgcagagtgacgttctcggtcgtg
agccagccccaggaccctcaccagggctctctgcagagctgctacgacagtggccttgac
gagtcggagacgcccagcagcaagagctccacaggccccggctgggagccctgcccctcc
ctgaggatgcctatgagaggaccacgccggatggcagtgtcggtgaggcagagcatatgg
aaaatggagaaaaagaacaataaaaactctcggcccctgccggatgtagccatgacgggg
aagtgtacgcgcgagtgtgacgagtacggccactcagacgcctgctggatgccggtgcgc
acttcacccgagcgcaggcccaaagccacccctcccaaactctccaccttcaactcgagc
tcggctggatgcagcggcgctgaaccagctacgagctccgatccactcgccaacggagag
ccctcgcacctgctcggagaccgcaaccgcaatctcctcaacaggaaaatggcctcctcc
tcttcctcctcctcagcctacgacgctttcggctcagccgccttctctgctaacgacgaa
acgtctcggcccgtcgaagagattcctctggcacccacaggcgaatataaacccacgcaa
tgcgggacgctcaccaggcgtgaggtttacctgtga
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