Tachysurus fulvidraco (yellow catfish): 113635267
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Entry
113635267 CDS
T08119
Name
(RefSeq) uncharacterized protein LOC113635267 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113635267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113635267
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113635267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
113635267
NCBI-ProteinID:
XP_026990382
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Position
23:18039545..18046852
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AA seq
555 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDIYGQSVDDDFCISPATAAQFIYSRQDSRQTRQVEPLEEEE
HEEEEEEMPTSPSVTQTLDPLTQDQLYSCLDQMRTVLGDSVPDSTLREAALKYDCDPQRA
LDSILSAESSSKQTAASKPHPPPQKGALSLSTPHNADRVTRVTSKRTQPQPGSGLSYSLS
DLLVRTEPDDAKGCDRVSCFAKDNLTSNTCVAAGASSLAQLMAEHEHKHASPAQGPNISI
SLGLGPGISLSSGLGVPPGLSSLTSVSPASSLLSCSLSSLSLQDPKVAGSLPVPLGSLSN
VWQASKAVDVGGVSKSPGVGGQGGSPSLAELIQEHKSNSPDLFSSLPGLQNFSGLTTNPL
CNTNTTKSQHSSTGLNNLPFPTLTANPPLPLPPGFTVTPSLSDLISQHPAPTPKLQSHVP
TTPLKEHKAVRAKQSSRIRKPEHVDLSTLMAQTSPEPSAPRSVSHSPASPCSNRTAAGVF
AEPSVFALTMCVQVRKRRSQRSRVRHPAFPYNKPMMRVKEGVQVSPLHHITPFSFNTPSP
DDIVKANQKKAFTRE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacaggaatgttcgagggtataattacgatgaagattttgaggacgatgac
atttatggacaatctgtggacgatgacttttgcatctcacctgctacggctgctcagttc
atttactcgcgtcaggactcgcggcagacgcggcaggtagaaccgctggaggaggaagaa
catgaggaggaggaggaggagatgccgacctcaccctccgtcacgcagacgctggaccca
ctgactcaagatcagctgtactcgtgtttagatcagatgaggacagtactgggagactct
gttcctgactccacactaagagaagcggctctgaagtacgactgcgatcctcaacgagct
ctcgactccattttgtctgccgaaagtagcagcaagcagacagcagcgtctaaaccccac
cctccaccacagaaaggagccttatccctttccacaccacacaacgctgatagggtcaca
cgtgtaacctcaaaacgcacacagcctcagcccgggtcagggctttcgtacagccttagc
gaccttttagtccggaccgagccagacgacgctaagggctgcgatcgggtttcttgtttt
gcgaaagacaatttaacttcaaatacttgtgtagctgcaggagcgagctctctggctcaa
cttatggctgagcatgagcacaagcatgcaagtccagctcagggtccaaatatctccatc
agtcttggtctgggacctggtatttccctctctagtggtctcggcgttcctcctggtctg
agcagtctcacctctgtgagccctgcatccagcctcctgtcttgctctctgagtagtctg
tctctacaagaccctaaggtggccggatcattgcctgttccactagggagtctgagtaac
gtctggcaggctagtaaggcagtggacgtgggtggggtcagcaaaagtcctggggtcgga
ggtcaaggcggaagcccctcgttggccgaactgattcaggagcataagagcaacagcccc
gatcttttcagttcacttccaggtctgcaaaacttctctgggcttacgacgaatccactg
tgtaacacgaacactactaaatctcagcacagcagcaccggtctcaacaatctgcctttt
ccgacactgactgctaaccctcctcttcctcttcctcctgggttcaccgtgacaccgtct
ttgtcagatctcatttctcaacacccagctccaacgccaaagctccagagccacgtgcct
acaacgcctcttaaagaacacaaagcggtgcgagctaagcagtcctctcggatccgtaaa
ccagaacacgtcgatttaagcacgctcatggcgcagacttcgcccgagccttctgctcct
cgtagcgtcagccactctcccgcttcaccttgctccaaccggacagcagcaggggttttc
gccgagccgtccgtattcgcgctcaccatgtgcgtgcaggtgaggaagaggagaagccag
cgcagcagggtcaggcatcccgctttcccctacaacaaaccgatgatgagagtgaaagaa
ggagtgcaggtttcacccctccatcacatcacaccgttctctttcaacacgccgtctccc
gacgacatagtcaaagccaaccagaagaaggcgtttacgagagagtag
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