Tachysurus fulvidraco (yellow catfish): 113635643
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Entry
113635643 CDS
T08119
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113635643 (arntl1a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113635643 (arntl1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
113635643
NCBI-ProteinID:
XP_026990992
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Position
17:complement(23523410..23536681)
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AA seq
627 aa
AA seq
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MADQRMDISSTINDFMSPGSTELISSSVGTPGMDYTRKRKGSATEYQIDGFSFDDSMDTD
KDKQLGRDDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR
MAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESV
YKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDAAPRERLIDAKTGLPVKADITPGP
SRLCSGARRSFFCRMKCNRPSVKTEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKM
GLDEDNEPDNEGCNLSCLVAIGRLHPHIVLQPVNGDIRVKPTEYVSRHAIDGKFVFVDQR
ATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKITTNCYKFKIKDGSFITL
RSRWFSFMNPWTKEVEYIVSTNTVVSGSVLPEGPDASYPQSASSPQSMDSVLTSGDGGGK
RVLQTFPGIPGGTRAGVGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITSTPPPDTCSP
GGKKIQNGGTPDLASSGLGPGPDSIGYPYSNNSIMSDNSHLSIDIMDEPGSSSPSNDEAA
MAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaaagaatggacatctcctccaccatcaacgacttcatgtctcctggatcc
acagagctgatcagtagttctgtaggaacaccaggcatggattacacacgcaagaggaag
ggcagtgccacagagtaccaaatagacggattttctttcgatgacagtatggacacggat
aaggacaaacaactaggaagagatgaccagcagggtcggataaagaacgccagggaagcg
cacagtcagatcgaaaagaggcgcagagacaagatgaacagttttatagacgaactggcg
tcgttggtgcctacgtgcaacgccatgtctcgcaagctggacaaactcactgtcctgcgc
atggccgtgcaacacatgaagaccttacgaggggctgcaaacccgtacacggaggccaac
tacaagccggcgtttttatccgacgacgaactcaagcacttgatattgagggctgccgat
ggattcctgtttgttgtcggatgtgatcgcggcaaaatcctgtttgtctcagagtctgtg
tataaaattctcaactacagccagaacgatctgattggtcagagcctgtttgactacctg
catccaaaagacattgctaaagtgaaggagcagctgtcatcatctgacgccgcgccaaga
gaacgactcatcgatgccaaaactggtttgcctgtaaaggcagacattacccccggtccc
tccaggctctgctcgggagctcgacgctccttcttctgcaggatgaaatgcaaccgtccg
tctgtgaaaacagaggacaaggacttcccttccacctgctccaagaagaaagcagaccgg
aagagcttctgcaccatccacagcacgggttacctgaagagctggcctcctaccaagatg
ggcctggacgaggacaacgagcctgataacgagggctgtaacctgagctgcctcgtggcc
atcggtcgtctgcacccccacatcgtcctccagccggtgaacggggacatccgcgtcaaa
cccacagaatacgtctcccgccacgccatcgacggcaagttcgtcttcgtcgaccagaga
gcgacggccattctagcgtatttacctcaggagcttctgggaacctccttctacgagtat
ttccatcaggacgacatcggacatctcgccgagtgccacagacaagttctgcagatgaga
gaaaagatcaccacaaactgttacaagtttaagatcaaagacgggtccttcatcactctg
cgcagccgctggttcagtttcatgaacccttggaccaaagaggtggagtacatcgtctcc
accaacaccgtggtctcagggagcgtgctgccggaaggaccggacgccagttatcctcag
tcggcttcctcgcctcagagcatggacagcgtgctgacatccggagacggtggagggaag
cgagttctccagacgttcccgggcatcccgggaggcacgcgagccggcgtgggcaaaatc
ggacgcatgatcgcagaagaggtgatggagatccagaggattcgaggctcgtctccatcc
agctgtggttccagcccgctcaacatcaccagcacccctccgcctgacacctgttcgccg
gggggcaagaaaatacaaaacggcggaaccccggacctggcgtccagcggactcggaccc
ggcccggactccatcggctacccgtactccaacaactccataatgagcgataactcccac
ctgagcatcgacatcatggacgaacccggctccagcagccccagtaacgacgaggcagcc
atggccgtcatcatgagcctgctggaggccgacgcaggcctcggaggcccggtggacttc
agcgacctaccctggcccttatga
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