KEGG   Tachysurus fulvidraco (yellow catfish): 113635685
Entry
113635685         CDS       T08119                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03420  Nucleotide excision repair
tfd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113635685 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113635685 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113635685 (cul4b)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113635685 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113635685 (cul4b)
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     113635685 (cul4b)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113635685 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113635685 (cul4b)
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113635685 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 113635685
NCBI-ProteinID: XP_026991053
LinkDB
Position
17:complement(12423954..12437021)
AA seq 856 aa
MFPTGLPSPKPPAPSQEARAAASDVSSDSSLTPCRKRKILSSDREDTDSVSASPRSPKAV
CNSSASCSSSSSSQHIQKKLRFEERSECTGLDVKMAEESPTASCSKAKSAFFSGHANGLT
KSAGSATFTTNSKPGAAKKLVIKNFKEKPKLPENYTRETWQKLKDAVEAIQNSTSIKYNL
EELYQAVENLCSHKISAKLYKQLRLVCEDHIKAQIDEFREDSLDSVLFLKKIDKCWQDHC
RQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDWKVQSKTIDGILLLIERE
RNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHV
NKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRIQDLSLLY
QLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDSIIDICFMKN
EKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFI
YGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKD
IMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHS
GRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLATGIEDGE
LRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQAS
TTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRD
YMERDKENSNQYNYVA
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaaacccccagcgccaagccaagaggccagagcg
gcagcttcggatgtcagcagcgacagcagcctgacgccttgcaggaagaggaagattctc
agctccgacagagaggacactgattccgtctctgcgtctccgagatcccctaaagcagtg
tgcaattcctctgcgtcctgctcttcctcctcctcctcgcagcacatccagaagaagttg
cggttcgaggagcgctcggagtgcacagggctggatgtaaagatggcagaagaatctccg
accgcatcgtgctccaaggcgaaaagcgcttttttctccggtcacgcaaacggactcacc
aaatccgccggatccgcgacattcaccaccaatagcaaacccggagctgctaagaaactt
gtgatcaaaaactttaaggaaaagccaaaattgcctgaaaactacacacgtgagacatgg
cagaagctgaaggatgcagtggaagccattcagaatagcacgtcaataaagtacaatctg
gaggaactttatcaggctgttgagaatttgtgctcccataagatatctgccaagctgtat
aagcagctgagattggtttgtgaagaccacattaaggcacaaatcgatgagtttcgagag
gactctctggacagtgtgctattcttgaagaaaatagacaagtgttggcaagatcactgc
agacagatgatcatgattaggagtatatttttgtttttggatcgcacatatgttttacaa
aattcaatgctgccatcaatctgggacatgggactggagttgtttcgtttctacattatc
agtgattggaaagtacagagcaagacgattgacgggatcctactcctcatagagagagaa
cgcaatggggaggctatagaccgctctctcttgagaagtctgctgagcatgctgtctgac
ctccagatttatcaggattcatttgagcaacgctttctggaggagacaaatcggctgtat
gctgcagaaggtcagaggctgatgcaggaaagagaggtgcctgagtatctccatcatgta
aacaaacgcttggaggaggaagcagacagagtcatcacatacttggaccagagcacacaa
aaacctctcattgccactgtggagaagcagttacttggtgaacatctgacagcaacactt
cagaaagggttgaatcatctgctggatgagaatcgtatccaggacttgtctttgctgtat
cagctgttcagtcgagttcgggggggagtgcaggtccttctgcagcactggattgagtac
atcaaggccttcggtagcacaatagtgatcaatcctgagaaagacaagacaatggtgcag
gaactgctggacttcaaagataaagtggactccatcatcgatatatgcttcatgaagaat
gaaaaatttgtaaatgccatgaaggaagcttttgagaccttcatcaacaagcggccgaac
aaacctgcagagctcatagcaaaatatgtggattcaaaactgcgggcaggaaataaggaa
gccacagatgaagaacttgagaagatgctagacaagattatgatcatattcaggtttatt
tatggcaaagatgtgtttgaggccttctacaaaaaagacctggcaaagaggttgctggtc
ggaaaaagtgcctctgtcgatgctgagaagtcgatgctctcaaaactgaaacatgaatgt
ggagcagcttttaccagtaaattggaaggaatgttcaaggacatggagctctcaaaagat
attatggtgcaattcaaacagtacatgcaatgccaaaatattccaggaaacattgagctg
accgtgaacattctcactatgggttactggccaacatacgtccccatggaagttcatctg
cctgctgagatggtaagactacaagaaatctttaagaccttttatcttgggaagcacagt
ggaagaaaactacagtggcagtcgacattaggacattgtgtattaaaagctgaattcaaa
gaggggaagaaagagctgcaggtgtcactgtttcagacattagttctgctcatgtttaat
gagggagaagaattttccttggaagagatcaaactggccacaggaatagaggatggcgag
ctgaggcgtaccctccagtccctggcttgtggcaaggcgagagttctcaccaaaaccccc
aaaagtaaagacgtggaagatggagacaagttttcctgtaatgatgatttcaagcacaag
ctcttcaggattaagatcaaccagatccagatgaaagaaacggtggaggagcaggcaagc
actacagagcgagtgttccaggaccggcaataccagattgacgctgccatcgtccgcatt
atgaagatgaggaagactttgagtcataacctccttgtgtctgaggtttacaaccaactc
aagttccctgtaaagcctgctgatttaaagaagaggatagagtcgctcatcgatagagac
tacatggaaagagacaaggagaattctaatcagtacaattatgtggcttag

DBGET integrated database retrieval system