KEGG   Tachysurus fulvidraco (yellow catfish): 113635709
Entry
113635709         CDS       T08119                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfd01009]
    113635709 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113635709 (smek1)
Protein phosphatases and associated proteins [BR:tfd01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     113635709 (smek1)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     113635709 (smek1)
SSDB
Motif
Pfam: PP4R3 WH1 Ran_BP1 TMEM164
Other DBs
NCBI-GeneID: 113635709
NCBI-ProteinID: XP_026991099
LinkDB
Position
9:complement(21708627..21726585)
AA seq 818 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGMSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQELIDESEEE
RFEDMSSPGLELPPCELSRLEEVAELVASSLPSPLRREKLALALENEGYIRKLLELFRVC
EDLENREGLHHLYDIVKGIFLLNRTALFEVMFSDECIMDVIGCLEFDPALPQPRRHREFL
TTTARFKEVIPITDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTELFAQLTDEATDDDKRQELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVHVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLSFFYKHCMHVLSAPLLANT
TEDKPSKDDFQTCQLLALIVELLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLAL
CSLRFMRKIVGLKDEFYNRYIMRNFLFEPVVKAFLNNGSRYNLINSAIIEMFEYVRVEDV
KSLTAHIIENYWKALEDVDYVQTFKGLKLRYEQQRERQDNPKLDSSMRSILRNHRFRRDA
RTLEDEEEMWFNDEDDLEDGEAVVPPSDKMKNDEDLMDPISKFMERKKLKEAEEKEVLSG
KSSLSGRQSPSFKLSFSSSTKPSLSSPPTASLHPGSPGSPGSPGTGTRNSPPTAAVTTKG
GLVGLVDYPDDDEDDEDEEDSDNKAESPPLSKKSKLSS
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgactgacactcggcgacgagtgaaggtctacacgttgaatgaagaccggcagtgggat
gaccggggaacagggcacgtatcctccggttatgtcgaaaggctcaaaggcatgtctctg
ttggtgagggcagagagcgacggctctctgttgctggagtcaaaaatcaaccccaataca
gcatatcaaaaacagcaggacacattgattgtttggtctgaagcagaaaactatgacctg
gccctcagttttcaagagaaagctggttgtgatgagatctgggagaagatatgtcaggtt
cagggtaaggacccgtcggtggacatcacccaggagctgatcgatgaatcagaggaggag
cgttttgaggacatgtcctctcctggtctggagttgcctccatgcgagctctcacgcttg
gaagaggtggctgagctggtggcatcttcactgccatctccgctgcgacgtgagaagctg
gcgctagcgctggagaacgagggctatatccgcaagctgctggagctgtttcgtgtgtgt
gaggatttggagaatcgtgaaggcctgcaccacttgtatgacattgtcaagggtatcttt
cttctaaaccgcacggctctattcgaggttatgttctccgatgagtgtatcatggacgtg
atcggatgcctggaatttgatccggcattgccacagccacgccgccatcgtgagttcctt
accaccacagctcgctttaaggaggttattcccatcacagaccctgagctgcgccagaag
atccaccagacataccgtgtgcagtacatccaggacatggtgctgcctacaccttctgtg
tttgaagaaaacatgctttctaccctgcactcattcatcttcttcaacaaagtggagatt
gtcggtatgctacaggacgatgagaagtttcttacagagctctttgcacaactaacagat
gaggctacagatgacgacaaacggcaagaactggtcaattttctgaaggagttctgcgcc
ttctcgcagactctacagccacaaaacagagatgcgttcttcaagaccctctccaacatg
ggaattctgccagcgttggaagttatactggggatggatgatgtgcacgtgcggggtgca
gcaacagatatcttctcttacctggtggagtacaacccctctatggtgcgcgagtttgtc
atgcaggagtcccagcagaatgatgatgatatcttgttgattaatctaatcattgagcac
atgatctgtgatacggaccctgagctggggggagctgtgcagctaatggggctactgagg
accctagtggaccctgaaaacatgctggcaactgctaataaaacagaaaagacagagttc
ttaagttttttctataagcattgcatgcatgtgctctctgctccattgctggccaatacc
actgaggataaaccaagcaaagatgatttccagacttgccagttgttggctctgattgtg
gagctcctcaccttctgtgtggaacatcacacgtatcacataaagaactatattatcaac
aaagacatcctgcgcagagtgttggtgctcactgcatcccagcatgcctttctagccctc
tgttctttgcgatttatgaggaaaattgtcggactaaaggacgaattctacaaccgttat
atcatgaggaacttcctgtttgagccagtggtcaaagcgttcctcaacaatggttcccga
tacaacctcatcaactcagccattatagagatgtttgaatatgtgcgcgtggaggacgtg
aaatccctgacagctcacatcatagagaactactggaaagccctggaggatgtcgactat
gttcagacgtttaagggtctcaagcttcggtatgagcagcagagggaaagacaggacaac
ccgaaactcgacagcagcatgcgatcaattttacggaaccaccgttttcggcgggacgca
cggaccttagaggacgaggaggaaatgtggtttaatgatgaagatgacttggaggacgga
gaggcggtggtaccgccctcagacaaaatgaagaatgatgaggacctgatggatcctatc
agcaagttcatggaaagaaagaagttaaaagaggccgaggagaaagaggttttgtcaggg
aaatcgagcttgtccgggagacagagccccagttttaaactgtccttctccagctcgacc
aagcccagtctgtcttcacctcccacagcctcactgcatcctggctcacctggatcaccg
ggttctcctggcacagggaccaggaactctccgcccacggcagctgtcaccacaaagggc
ggtttggtgggacttgtggactatcctgacgatgacgaggacgacgaggacgaagaagat
tcggacaataaagcggagagccctccgctttccaagaaatcgaagctcagctcctaa

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