Tachysurus fulvidraco (yellow catfish): 113635742
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Entry
113635742 CDS
T08119
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04110
Cell cycle
tfd04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113635742 (smc1b)
04114 Oocyte meiosis
113635742 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113635742 (smc1b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113635742 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
113635742 (smc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
113635742
NCBI-ProteinID:
XP_047658184
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Position
17:complement(22536900..22549157)
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AA seq
1252 aa
AA seq
DB search
MSTFVAIFIDLLCEKKVNMGYLKQIDVENFKSWKGKQTIGPFKSFTCVIGTNGSGKSNVM
DALGFVMGEKASSLRVKQTKDLIYGAHVNKPVSRTASVTMCFCNDNDEETTFSRTISGES
SEYRVNGRQVTPSRYRAELDNIGIVVKARNCLVFQGAVESIAMMNAKERTKLFERISNSI
ELANEYDTKLAALQKAKEDTQFHFNRKRAAAAEKKQVFKDKTEAEKYQALVEQLGESKLH
LSLFQLYHNERRINALVEFMREKQEAVTVKKSIVEDWEQSVKAQKKEHGRLNRELQKLEK
EIKSQEETLSQQRPHYIKAKVNTSHHQRKVEETCTSLLKTKRQQGKKEQDLQELETELAE
LEKAWRVYETEIAEQAAQRGEDVQLEDAQLERYKELKELARKKGAVLLQKAEKLHWEVKA
DREKLEFDKRRTSEVEANIKRGEEHLDELNRKAEKLEEYAITSNKALDEQLEQERCLRET
LERGRLRMLEVNEELGMVGQELQSARMDSQENRKQQKRDELFQSLRRLYPDVVYGRLMDL
CQPIHKKYQLAVTKVFGHYMNAIVVSTAKVARDCIRIIKEERAERETFLPIDNLDVKPLN
ERLREVRGAKMVVDVVQCSQNAPQLKRVVQFVCGNSLVCENLKDARHVAFDGPERLKTVS
LDGTLFSKSGVISGGSVHLRHKARRWEEKDMNGLKERKEQLSAELRELIKLKRKEAELHQ
ITAQAHGIQTRLKYSNSELESIRKKIIPTRQSEISRLQSELSNMKSQIEMQADNVQVNDS
RVSALQDEINHMEDTVFSDFCAEIGVANIREYEQDYVRQQGEIENKRLQFESQRTRLNTQ
LEYEREQLHKQRRLISKIEDSIKKEEDVILMLKKEEEKLLVAVDESQCKLQDLKNMQAEQ
KSCINKAKAELDKRISVHQENSRELTKQQKEMISVETALEHQKLCKHNLLLGCKIEGLPL
TVLSGSLDDISDIELDSDSVSITTQSIYEREAQILMDYRHLGDNLKSLTEEQEVMSQLEV
LTEQVSSLEKLIHMSKPPNMKALEKMSEVKDTFRGVADAFEASTSVAKKCHKEFEQVKAM
RFHRFSQCFEHVSVTINHIYKDLCRNDSAQATLSAENPDEPYLGGISYNCVAPGKRFMSM
DNLSGGEKSIAALALVFAIHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRNNFQVI
VISLKEEFYSRSDALLGVYSKFNDCMSSHLLSLDLTPYPLNDENSEEPERWT
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttcgtcgcaatttttattgatttactttgtgaaaaaaaagtgaatatgggc
tacttaaaacagatagacgtggaaaatttcaagtcatggaaaggaaagcagacaataggt
ccgtttaaaagcttcacgtgcgtcattgggactaacggttcaggtaagtcgaatgtgatg
gacgctctggggtttgtgatgggagagaaagcctccagtctgagagtgaagcaaaccaaa
gacctgatttatggcgcccacgttaataaaccggtctcccggaccgcgtcggtcactatg
tgcttctgcaacgataacgacgaagaaactaccttcagcagaactatatcaggtgagtcc
tccgagtaccgagtcaacggcaggcaggtgacaccgagtcggtacagagccgagctggac
aacataggcatcgtcgtgaaagccaggaactgcttagtgtttcagggtgcagtggagtct
atcgctatgatgaatgcaaaggaacgtacaaagctgtttgaacgcatcagtaactccatt
gagttggcaaacgaatacgacaccaagctagcagcactgcagaaagcaaaagaagacacg
cagttccattttaatcgcaaacgggcagccgctgcagagaagaagcaggtgttcaaggat
aaaactgaggcagagaaatatcaggcactggtggagcagctcggtgaaagcaagctgcac
ctcagccttttccagctttatcacaatgagaggcgtattaatgcactcgtggagttcatg
agagagaaacaggaagctgtcactgtcaaaaagagcatagtggaggattgggagcaaagt
gtgaaggctcagaagaaagagcacggacgcctaaaccgagaactgcagaaactagagaag
gagatcaagtcccaggaggaaaccctcagccagcagaggcctcattacatcaaggccaaa
gtgaacaccagccaccaccagcgcaaggtcgaggaaacgtgcaccagcctgctgaagacc
aagaggcagcaaggcaagaaggaacaggatctgcaggaactggagactgagctggccgag
ctagagaaggcctggagagtttatgagacagagatagcggagcaggctgctcagaggggc
gaggacgtacagcttgaggacgctcagctggagcgttataaagagctgaaggaactggcc
aggaaaaaaggggccgtcttattacagaaagctgagaaactacactgggaggtgaaggct
gatcgggaaaagctggaatttgacaaaaggcgaacaagtgaagtcgaggcaaacattaag
cgtggcgaagaacatctagacgagttaaacaggaaggcagagaaactggaggaatatgcc
atcacctctaacaaagctcttgatgagcagctggagcaggagcggtgcttgagggagaca
ttggagcgtggacggttgaggatgctagaagtgaacgaagaactgggcatggtagggcag
gaacttcagagcgctcgcatggatagccaggagaatcggaaacaacagaaacgagacgag
ctctttcagagcctgcgtagactctacccggacgttgtgtacggacgattgatggacttg
tgtcaaccgatccacaagaaatatcagcttgctgtcacaaaggtgttcggtcattacatg
aacgccattgtggtgtccacggcaaaagtggcccgtgactgcattcggatcataaaagag
gagagagctgagagagagaccttcctccctatcgacaacctggatgtaaagccgctaaat
gagcgtctcagggaggtccgtggggccaagatggtggtggatgtggtgcagtgttcccag
aatgcaccacagttgaagagagtggtgcagtttgtgtgtggaaattcccttgtgtgtgag
aatctgaaagatgcccgccatgttgcttttgacggcccagagcgccttaagaccgtgtct
ttagatggtaccttgttctccaagtcgggggtgatctctggtggctctgttcacctgcgg
cataaagctcggcgctgggaggagaaagacatgaatggcctaaaagagcgaaaggagcag
cttagtgcagagctaagggaattaataaaacttaaacgcaaggaggctgagctacatcag
atcacagcccaggcccacggaatccagactcgcctcaaatactctaactctgagctggag
tccatccgcaaaaaaatcatccctacccgtcagtctgaaatctccagactgcagagtgag
ctctcaaacatgaagtctcagatcgagatgcaggccgataacgtgcaagtgaacgacagt
cgtgtgtcagccctccaggacgaaatcaatcacatggaggacacggtattctcagacttc
tgcgctgagatcggagtagccaacattcgtgagtacgagcaggattatgtgagacagcaa
ggagagatcgagaataagcggctgcagtttgagtcgcaacggactcgtctgaacacacag
ttggagtacgagcgggagcagctgcacaagcagcgcaggctgatcagtaaaatagaggac
tctatcaagaaggaggaagatgttatcctcatgttaaaaaaggaggaagagaagctgctt
gttgcagtagacgaatctcagtgtaagctccaagacttaaagaatatgcaggcagaacaa
aagtcttgtattaataaagcgaaggctgagctggataagagaatcagtgtccatcaagag
aactccagggaactaacaaagcaacagaaggagatgatctctgtggaaactgcattggaa
catcagaaactttgcaaacacaacttactcctgggctgcaaaattgagggcctgcctctc
acagtgctgtcaggatcactcgacgacatcagtgacatcgagctggactctgattccgta
agcatcactacacaaagcatttatgagcgagaagcacagattctgatggattatagacat
ctgggagataatctgaagagtctgactgaggagcaggaggttatgtcacagctggaggtg
ctgacagagcaagtgtcatctctagagaaattgatccatatgtccaaaccacccaatatg
aaggccttggagaagatgagtgaggtgaaggacacgtttcgtggtgtggctgatgcattc
gaggccagcacaagtgtagctaagaaatgccataaggagtttgagcaagtcaaggccatg
cgcttccatcggttcagccagtgctttgagcacgtttccgtcaccatcaaccatatttac
aaagacctctgcagaaatgacagtgctcaagcgactctgagtgcagaaaatcccgatgag
ccatacttgggtggtatcagttataactgtgtggctcctggcaagagatttatgtccatg
gacaacctgtcaggaggagagaagtccattgcagcactcgctctggtgtttgctattcac
agtttccgtcctgctccgttctttgtgctggatgaagtggatgctgctttggacaacaca
aacattggaaaggtgacaagctttattagggaacaatccagaaataactttcaggtcatt
gtcatctcactgaaggaggagttctattcacgctcagatgctctgctgggagtctactct
aagttcaatgactgcatgtccagccacctcctgtcactggatctcactccataccccctc
aacgacgaaaacagcgaagagccagagagatggacatga
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