Tachysurus fulvidraco (yellow catfish): 113635806
Help
Entry
113635806 CDS
T08119
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113635806 (syvn1)
04120 Ubiquitin mediated proteolysis
113635806 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113635806 (syvn1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113635806 (syvn1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113635806 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113635806
NCBI-ProteinID:
XP_047658472
LinkDB
All DBs
Position
17:17239921..17247781
Genome browser
AA seq
610 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNITPAAAAPAAPAAPANAPAP
PAANVAPGVMPQFPPGLFPFWAPFPGAVPPAAPPAAQAASSTPQTSADAIQTSGAESGAS
SSSQTGADGAAAAAAAPVAGVPGFPFSMPPPFPSAPWLPMPPPPPFMSTMPPPPPSLSTM
SEEELRELEQEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLTTVASLSPPRAESSTSEMS
GSGKTEASTQESGSQIAGSVSGATGFSQPDSTTEVEKKEEEEAEVDGEPSAAELRRRRLR
KLDTTPPLDQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagcagctttggtaacagccaccagtctggctctcaccggagccgtggtggct
catgcctatttcctcaaacaccagttctatcctacagtggtatacctcaccaaaagcagt
ccaagcatggcagttttatatatccaggcattcgtgttggtttttcttctgggaaagttc
atgcgcaaggtgttctttggccagctgagagctgcagagatggagcacctgatcgagcgt
tcctggtatgcagtgacagagacttgcttagcctttacagtcttcagggatgacttctcc
ccccgtttcgtggcccttttcactttgctgctcttcctcaagtgctttcattggctggct
gaagacagagtggactttatggaaagaagtccaaatatttcatgggtcttccacttcaga
gttctctctctaatggtgttgctaggagtactagatttcttatttgtcaaccatgcctgc
cacagcattatcaccagaggagcttcagtacagctagtcttcggttttgagtatgcaatt
ctgatgaccatggttctcaccaccttcattaaatacactctgcacaccatagaccttcag
agtgagaacccatgggacaataaagcagtctatatgctttacacagagctctttacagga
tttattaaggtgctgctctacatggcattcatgaccataatgatcaaagtgcacaccttc
cccctgtttgccattcgacccatgtatctcgcaatgaggcagttcaagaaagctgtaaca
gatgccataatgtctcgacgagccattcgcaacatgaacacactttacccagatgcaact
cctgaggacttgcaagcttctgacaatgtgtgtatcatctgtcgagaagagatggtaact
ggagccaagaagctgccttgcaaccacatctttcactctagttgtcttcggtcatggttc
cagaggcagcagacatgtccgacatgccgcatggatgttctgcgagcttcacagccaaat
atcactcctgctgctgctgcccctgcagccccagcagctccagctaatgctcctgctccc
ccggctgctaatgttgctccgggtgtgatgcctcaattccccccaggccttttcccattt
tgggctcccttccctggtgcagttcctcctgctgctcctcctgctgctcaggcagcctcc
agcacaccacagaccagtgcagatgcgatccaaacgtcaggggcagaatcaggagcaagt
agctcaagccagactggtgcagatggtgctgctgctgctgctgcagctcctgtggctgga
gtgcctggcttccccttttctatgccccctccatttccatcagcaccatggttgcccatg
cctcctcctccacctttcatgtcgacgatgcctccacccccaccatctctgtccacaatg
tcagaggaagaactgagggagttggagcaggaaggtcgccgcggtctggaggccagactg
cagtgccttcagaacatccacacactgctggatgctgccatgcttaatatccaccattac
ctcacgactgtagcttcgctcagtcctcctcgagcagagagcagcactagtgaaatgagt
ggatcaggaaaaactgaagcttccacccaagagagtggatcacaaatcgctggttctgtc
agtggagctactggattttcccaaccagattccactacagaagttgagaagaaggaggaa
gaagaggcagaggtggacggagagccaagcgctgctgaactgagacgtcgccgcctacgc
aagctggacaccacaccgcctctggaccaatga
DBGET
integrated database retrieval system
