Tachysurus fulvidraco (yellow catfish): 113635857
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Entry
113635857 CDS
T08119
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113635857 (rlim)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113635857 (rlim)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113635857 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
113635857
NCBI-ProteinID:
XP_026991357
LinkDB
All DBs
Position
17:8726920..8734588
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AA seq
633 aa
AA seq
DB search
MEGSDNADQGSSEQADSQRRQQQDRLNREEAFYQFVNNLSEEDYRLMRDNNLFGTPGEIT
EEELLNRLHQARDGPEQPHSSSSNNSPEVSRVEPRVSEAEGTEEASNGDTLLDWLNTVRQ
TGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRNIAEQQTQTEADRTEAEQSNAD
APVPEPETPMETAEVVEEPVVEEMAVVVEPELPAPSSPAATRPTSPQNQVPRSPSPPPVE
RPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPDPVPEVQVGS
SYRTRLHAFSRQNIQLESEETVATTEPQPAPQPPQETEASSGEASASARRPPTIMLDLQV
RRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVSTIRIP
IRRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAADLADALAN
PDAGSPSTEPSPGVGGSNPSGSEAQTEEREDSGASLRESRARQRPPISLEDSGSLPFLRL
AHFFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHE
YHVHCIDRWLSENSTCPICRRAVLVSANRESIV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcagacaatgcagaccagggcagtagtgaacaggccgattcacaacgcagg
caacaacaggaccgcctgaacagagaggaagccttctaccagtttgtgaacaatctgagc
gaggaggattacaggctgatgagagacaacaatcttttcggcacaccgggtgaaattact
gaggaggagttgttgaaccgccttcatcaagctagggatggccccgaacagccacacagt
agcagcagcaacaatagtcctgaagtcagcagggtggagcccagagtttcagaggcagag
ggtacagaagaagcatctaatggtgacacccttcttgactggctcaacactgtgcgtcaa
acgggcaacaccacaagaagtgggcaccggggcaaccagtcatggcgggcagtgagccga
accaatccaagtagtggagacttccgcttcagcttggaaataaacataaatcgcaacata
gctgagcagcaaacacagactgaagctgatcgtacagaagcagagcaaagcaatgctgat
gcccctgtacctgaacctgagacacccatggagacagcagaggtggttgaagagccagtg
gtggaggagatggctgttgtagttgaaccagagcttcctgcacctagtagcccagctgca
acccggccaacaagcccacaaaatcaggttccacgttctccaagtccccctccagtagag
aggccaagtagaggccagattagagctcgtagtccaagcccggaacagcgcagaactagg
gcgcgaacagctaggagtcatttagctctcagtctagaccagttagatgggcttccacaa
gcacgccatggactaccctctcgaagtcctgatccagtcccagaagttcaggtaggcagc
agttacaggacccgactacatgctttttctcggcagaatatacagttagaaagcgaagaa
actgttgcgactacagagccccaaccagcacctcagcctccccaggaaactgaagcatct
tcaggagaagcaagtgcttcagcccggcgtcctccaacaataatgctggacttgcaggtt
cgtagggtgcgaccgggcgagtatcgtgagagagacagcattgccaatcgcacacgctct
cgatcacagacctccaataacactttcttgtatgaaactgagcgtggaggcttccgcagg
accttttcgcgttcagagcgagcaggtgtgaggacgtatgtcagcactattcgcattccc
atcaggaggatctctgatgctgggcttggtgaggccacctccatggccctacaatccatg
atccggcagatcatgactggctttggtgaactcagctactttatggactctgactcagac
tccacagactcaagccgtggctccaatcccgcggcagatctggctgatgctctggcaaat
ccagatgctggaagtccttcgactgagccatcacctggggtaggaggttcaaatccgagt
ggctcagaagcacagactgaagaaagggaggacagtggtgcatctctcagagagagcagg
gcgaggcaacgacctcctatcagtctagaggattctggctctttgccctttctgcgactt
gcacatttcttcttgctcaatgatgatgatgatgatcagcccaggggcctcaccaaagag
caaatcgataacctctccatgcgcaattttggtgagagtgatgcactcaagacatgtagt
gtctgcattacagagtatgctgaaggcaacaagcttcgtaaacttccctgctcacatgaa
taccatgtgcattgtattgaccgttggctttcagagaattcaacttgccccatctgtcgc
agggcagttcttgtgtctgctaacagagagagcattgtctag
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