Tachysurus fulvidraco (yellow catfish): 113635907
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Entry
113635907 CDS
T08119
Symbol
cnot4a
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113635907 (cnot4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113635907 (cnot4a)
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113635907 (cnot4a)
04121 Ubiquitin system [BR:
tfd04121
]
113635907 (cnot4a)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113635907 (cnot4a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
113635907 (cnot4a)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113635907 (cnot4a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113635907 (cnot4a)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113635907 (cnot4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Med7
MoCF_biosynth
DZR_2
RDD1
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
113635907
NCBI-ProteinID:
XP_026991443
LinkDB
All DBs
Position
17:complement(19351276..19364182)
Genome browser
AA seq
768 aa
AA seq
DB search
MSRSPELKEDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKANPNFLQTSTCGGEKTKNKANTTQRQNSGGKEGWPLLQGYSKLVNGLPTEHRKS
PPLLDCLTDSDHMTPEEPDPELGTDQNTGLSHFPSVLEPTSPVDKPTEPVSIVNGENIAQ
VSSDSPSPPPGFSKPSLAVPISVAELTVRSPFEGAPAESQSLFSDNSNFRHPNPIPSSLP
SFPNSPQSGSDWPMTPEPQSLFTSDTIPVSSSTDWQAAFGFGSSAKQQQQEDDLGFDPFD
VTRKALADLIEKELSVQEALPHSSSLLPNGQPRLPSLQHRGLYNSFSLPANAHASPARQP
WMGLPTRNNLAHLNHITHNHFLDPSCPQQHHSTGLGGITISAENSGSVESINVKEWQDGL
RALLPNININFGGIPNSTSSSSSSSSSSTSSMNHMGVPAGPVGLSHSLSWDGTTSWMDPA
IITGIPASTGSNLDCVQDENPPHWLKSLQTLTEIDGPGGSVVSQPRHSGVLDSTVRLPLH
RGSWAPYLPPPSVAPSHFHSPPPGFQTAFRPPAQMTTDLLQSAAMERH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtagccctgagctgaaggaagaccccatggagtgccctctgtgtatggagccc
ctggagattgacgatgtcaacttcttcccgtgtacctgcggttaccaaatctgccgtttc
tgctggcatcgcatccggacagacgagaacggcctctgcccagcctgcagaaagccgtac
ccggaggatccggctgtgtacaagcccctctcacaggaggagatccagaggataaagaac
gagaagaagcaaaagcagaacgagaagaagcagaaggtgactgagaaccggaagcacctg
gccagtgtgcgtgtggtgcagcggaacctggtgttcgtagtgggtctctctcagaggctt
gcggaccctgaggtccttaagaggccagagtatttcggaaagttcggcaaaatacataaa
gtggtcatcaataacagtacgtcgtatgcgggctcacagggtcctagtgccagtgcctat
gttacatacatccgctcagaagatgctctaagagcaatacagtgtgttaataatgtggta
gtcgacggtagaacactcaaggcttctttaggcacgacaaagtactgcagctattttcta
aaaagtatgcaatgccctaagccggactgtatgtatctgcatgaactgggagatgaggca
gctagttttactaaagaagagatgcaggctgggaaacaccaggaatatgaacaaaaacta
ctccaagatctttacaaagcaaatcccaactttctacaaacttcaacatgtggaggagaa
aagactaaaaacaaagcaaacactacacaaagacagaacagtggtggtaaagagggttgg
ccgttattacagggttacagtaaactagtcaatggtttacctacagaacaccggaagtcc
ccaccccttttagactgtttgaccgactccgatcacatgaccccggaagagccagaccct
gagttaggaacagatcaaaacacaggactctcacactttccctcagtcttagaacctacc
agtcctgttgataaaccaacagaacctgtaagtatagtgaatggagagaatatagcacag
gtcagcagtgactcgccttctcctcctcctgggttttctaagccaagcctggcagtgccc
atcagtgtggcagaacttacagtacgctcaccctttgagggagcacctgctgaatctcag
tccctcttctcagacaacagtaacttcagacatccgaaccccatccccagcagcctgccc
tctttccctaactccccacagagtggctctgactggcccatgacccctgaacctcagagc
ctctttacctcagacaccatccctgtgtcctcatccacagactggcaagcggctttcggc
tttggctcgtcagccaagcaacagcaacaggaggacgatctgggttttgacccgtttgat
gtgacaaggaaagcactagctgacctcattgagaaggaactgtcggtacaggaagccttg
ccacattcttcgtcactcctccctaatggccaaccacgcttaccctccctgcagcaccgt
ggtctctacaactccttcagcctgcctgcgaacgcccatgcctcacctgcacgccagccc
tggatgggccttcccactcgcaacaacctcgcacacttaaaccacatcacacacaaccac
ttcctagacccaagctgcccacaacaacaccacagcacaggcctcgggggaataactata
tcagcagaaaacagcgggtcagtggaaagcataaacgtcaaagagtggcaggacggcctg
agagcactccttccaaacatcaacatcaatttcggaggcatcccaaattccacatcatca
tcttcctcttcctcgtcttcttccacctccagtatgaatcacatgggggtcccagcaggt
ccagtgggtctttcgcacagcctgagctgggacggcacaacaagctggatggatccagcc
atcatcactggtattccagcatccaccggcagcaatttggactgtgtgcaggacgagaac
cctccgcactggctcaagtctctacaaactctgactgagatagatgggcccggcggttca
gtggtttctcagcctcgtcactcgggcgtgctggactccacagttcggcttcctctgcac
agaggcagctgggcaccctacctccctcctccatcagttgctcccagccacttccactct
cctcccccaggcttccagacagccttcagaccgccagcacagatgacaacagacctccta
cagagcgccgcaatggagcgccactag
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integrated database retrieval system
