Tachysurus fulvidraco (yellow catfish): 113635954
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Entry
113635954 CDS
T08119
Name
(RefSeq) uncharacterized protein LOC113635954 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113635954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113635954
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113635954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
113635954
NCBI-ProteinID:
XP_026991551
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All DBs
Position
17:complement(18708685..18721649)
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AA seq
1369 aa
AA seq
DB search
MPLISLDDEDQRWVPTHVNVTVIRARALRTKGKQGSRYLYTVMQLGKLKYTTGLAEKSTE
PEWNEECSLELQPGLLEYAGAHPHGSGDLILTVMLRVLIGLDVFLGEAVVPLDKLFQSGT
CPRNEWLKLHSKSGRKEKERGELQLTIQFTRNNMTASMYDLTVQDKPRSAFGKLKDRVTG
KKKGDVESSSAILPGRYAALSGSTSQAFQEDGGVGNPAQDECTDEGKGKVKGFFLKGKLR
KNSDTRSCSSLASESSMASSAGDPFVPIELCSTPVYSSRVVEPFRTDSDGGVKVFTAPKV
MTHKRAHSDEASKITVAARQNMAVESVKGQNTVLSKSTLCINGSHVYSEPIYSKGPGSLP
IKRTLLEKCSPLSRSLQNLTRRSEDTQRRSSIDKSKKDLEGDAEGFSALAMGVNSSDGKP
VHATAPLAMASSTSDVADKGKKLRKTLFSSGRSDSLPAKPEQGQEGRLRGWFGSADSQNK
PRLGVPPKVESSPETSASLSPCHSTQSPRSLPLVSATTSFPVGSDSNPFSHPSPPPASIS
PTNPFLTRLQRNPFFEELIAEEALKSPPAISDCHNSPFNHYPAFPGRIGLPSTVRDITPN
KMFSIKRERPRSVAKQRSLPALTPETTTVNSNNAMQASHPLSESMGEWDEFEALATSRLK
SPVGTPTRPLSATISSSPSNTYPVEYCSTEPKMRNIGDERTSKDYNLPVLASRRPMRTPV
PFQERCSDSWLDRAQELAVQKEACVLFQTDLASIRHRERYRDANNKVSHLGKDLHCATLE
QNVNIYPTSHTVQMTRDENLNTLENGQEKFFTERGLNFALKNSQIGYEHTQQNSQNSASD
HTVPSTPFCLSDCDTTVSESMCSDFQVQINPESSSAPKPITDQQIKSIITTEDITNEDSN
NNNTNDTSQFAFIDCDSSHSDLNQTTFGMINKGSNKASTQCPVAADFDPSSILPVCGFSS
VPPQDLLNRMAELETPDTVVVASALSDNNHYEKPCDNLEHHSIQPHSNITVRFESEDSNY
KDSSVSPKIIPQRDRNDGNMMAQFKPEATEDNAGFNTPHEVGCCLIYDKIKTKKDEVMPE
ANSLKVTVSENCKISESPSTLTDAISFEDLHARVAPRGSQSPSKTEVRSARIRTHSTTNS
PKSDPSANLPTASSNISLTKLSLSVPKSPSPSFFHPNVTSDPSLSSLMHYPTTKPVLGST
LTEASNTTSTPQLQATAKHTLSPEEAEPASSRPPAEESSPHPVKPLTSTAVPGEKKSVLE
KLRSSIHPGRATQQNMAEPEKPPVWMTEAHTHYQTLSNMELIALLLQQEMDAERQRAESE
LQATLLEKREAEVKKLKVQVRDLEDYIDKLLVQIMEQTPTLLQIRARPK
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgatcagcctggacgatgaggatcagagatgggtcccaacccacgtcaacgtg
acggtcattcgggccagggcgctgcggaccaagggcaagcagggcagccgctatttgtac
accgttatgcagttggggaagctaaagtacaccacgggactggcagagaaatcgaccgag
cccgagtggaatgaggagtgttcactggagctgcagcccggcctgctggagtacgcgggg
gcgcatccccacggcagcggggatctgatcctcaccgtcatgctcagagtgctcatagga
cttgacgtgtttctcggcgaggccgtggtgcctctggacaagctgtttcagagtgggacg
tgtcctaggaacgagtggctaaagttgcactctaaatctggaaggaaggagaaggagcga
ggagaattgcagcttaccatccagtttactcgcaataatatgacagctagcatgtatgat
ctgaccgtccaggacaagcctcgctcagcctttggcaagctgaaagaccgtgtcacaggc
aagaaaaaaggagatgtggagtcttcctcagctatcctccctggccgctatgctgctctg
tcaggctcaacaagccaggcgttccaagaggatggtggggtggggaacccagcacaagat
gagtgtactgacgaaggcaagggcaaggtgaagggcttctttctgaagggaaagttgcga
aagaactcagacacacgctcctgttcctcgttggcctctgaaagcagtatggcatcgtca
gcaggggatccttttgttcccatagagctatgcagcacacctgtctacagcagcagagtg
gtggagcctttccgcactgactcagatggtggagtaaaggtgtttacggctcctaaagtg
atgacccacaagcgtgcacacagtgacgaggccagtaagatcacagttgccgcacgtcaa
aatatggctgtagagagtgtaaaaggccagaacacagtgctttcaaagtccaccctctgc
atcaatggcagccatgtttactctgaacccatctactccaaaggacccgggagtctgcca
atcaagagaacgctactagagaaatgctctcctttatcacgctcattgcagaatcttact
cgccgcagtgaagacacccagaggcgcagctccattgataagagcaaaaaggaccttgag
ggagatgctgagggtttctcagccctggctatgggagtcaactcctcagatgggaagccg
gtgcatgccactgcccctctggcgatggcttcttccacctcagatgttgcagataaaggg
aagaagctgaggaagactttgttctccagtgggaggagtgactctctcccagccaaaccg
gagcagggtcaggagggacgtctacgtggatggttcggttccgctgacagccaaaacaag
ccaaggctgggagttcctcctaaagtagaaagcagcccagaaacatccgcttccctctct
ccctgccactccactcaatcaccacgctctcttcccctagtttctgctactacatcattt
cctgttggttcagactctaatccattctcccatccctcacctccaccagcctccatctcc
cctaccaatcctttcctaacacgactccaaaggaaccccttttttgaggagctcatagca
gaagaagctttgaaatctcctcctgcgatttccgattgccataactctccattcaaccat
tacccagcatttcctgggaggattgggcttccaagtactgttcgtgatatcacaccaaac
aaaatgttttctataaagagagagaggccacggagtgtagctaagcagaggtccctccct
gccttaacaccagagactaccactgtgaactctaataatgcaatgcaagcaagccatcct
ttgtctgagagtatgggtgaatgggatgaatttgaagctttggccactagccgtcttaaa
tcgccagttggaactcccactcgaccgctctcagccacaatctcttcttcaccttccaac
acttatccagttgaatactgtagtactgaaccaaaaatgcggaatataggtgatgaaaga
acctccaaggactataatctacctgttttagcatcacgaaggccaatgaggaccccagtg
ccctttcaagagaggtgctcagacagctggctagaccgggcacaggagcttgcagtccaa
aaagaagcttgtgtgcttttccaaacagatttagcttcaatacgacatcgagagaggtat
agagatgcaaacaacaaagtttcccatttaggtaaagatttgcactgtgctactctggag
cagaatgtgaacatttatccaacttcacatactgtacaaatgaccagagatgaaaatctg
aacactttagaaaatggacaagagaaatttttcactgagagaggcctaaattttgcacta
aagaattcacaaattgggtatgaacacacacaacaaaactcccagaattctgcaagtgat
cacactgtgcccagtactccattttgcctctcagactgtgatacaactgtgagtgaatca
atgtgcagtgactttcaggtccagataaatcctgaatcctcctccgcaccaaagcccatt
actgatcaacagattaaaagcatcatcactactgaagacatcactaatgaagattccaat
aacaataatacaaatgacacttctcagtttgcttttattgactgtgacagctctcattca
gatttgaaccagactacgtttggaatgataaacaaaggcagtaacaaggcatcaacccag
tgcccagttgctgcagattttgatccatcttcgattttgccagtatgtgggttctcctct
gtgcctcctcaagatttattaaaccgaatggcagagctagaaactccagatactgttgtt
gttgcaagtgcattgtccgacaataaccattatgagaaaccctgtgacaacttagaacat
cacagcatccagccacattcaaatattacagtaaggtttgaatctgaggattccaattac
aaagatagctctgtaagtccaaaaataattccccagcgagacaggaatgacggaaatatg
atggcacagtttaaacctgaggcaacagaagacaatgcaggcttcaatacaccacatgaa
gttggatgctgtttgatttatgacaagattaagacaaaaaaagatgaagtcatgccagaa
gcgaatagcttgaaagttactgtttcagagaactgcaaaatcagtgaatcaccttcgact
ctcacagatgccatcagttttgaggacttgcatgctcgagtagcaccgagaggctcacaa
agcccttccaaaactgaagttagatcagcacgcattagaacacattccactacaaattcc
cccaagtctgacccgagcgcaaatctaccaacagcaagctctaacattagtttaaccaaa
ctttcactatctgtgcctaagagtccatccccttctttcttccatcctaatgtcacttct
gaccccagcctatcctcgcttatgcattacccaaccacaaagcctgttttgggaagcact
ctgaccgaggcctcgaacaccacctccacacctcagctacaggctactgcaaagcacaca
ctttccccagaggaggcagagccagctagcagtcgccctcccgctgaggagagcagccct
catccagtgaagcctctgaccagcacagcagtgccgggagagaagaaatcagtgctggag
aaactgcgttcgtctatccaccctgggcgcgccacacagcagaacatggctgagccggag
aaaccaccggtgtggatgacagaggcccacactcactaccagactctgagtaacatggag
ctgattgctctactgctgcaacaggagatggatgcagaaagacagagggcagagtcagag
ctccaggctacactgttagagaagcgtgaggctgaggtgaagaagctaaaagtccaggtg
cgggatctggaggactacattgataagctgctggtgcagatcatggagcaaacacccacc
ttgctgcaaattcgtgcccggccaaaatag
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