KEGG   Tachysurus fulvidraco (yellow catfish): 113635963
Entry
113635963         CDS       T08119                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tfd03036]
    113635963 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tfd04812]
    113635963 (nedd1)
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     113635963 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     113635963 (nedd1)
Cytoskeleton proteins [BR:tfd04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     113635963 (nedd1)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th NBCH_WD40 eIF2A Beta-prop_IFT122_1st WD40_like Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 113635963
NCBI-ProteinID: XP_026991565
LinkDB
Position
17:19179736..19186893
AA seq 672 aa
MEEVTRLVSSGDCLKIWDSTSMSVVEQFNPHSASHPLAQVCWSSSNQYIVSASSIGDKLV
VTSLKSSPVLVMELAEGKKQTRVALNSTSQFLVSGGLDNTVNIWDLKTKRLHRSLKDHKE
EVTCVSFNGGDSYIVSGSTSGDIILHSITTNLSSKAFGHGPNEPVHDLKYSLIKRSLLGS
VSDSGSVVLWDANTQKELHMFEGAHKAPASGLAFSPANDLLFITVGLDKRIVCYDTSSKV
IFRSKQVESPLTAVDFTPDGAGLVVGSTHGRIYMYDLRNLSAPVKTTTAHKTSVTCIRFQ
HSNTRLKTSKTVSGKTSSQSNKRISVKLGHNQQSGPPTPTSLVPAVPEQQPVSRGDGQAH
SLGSGARSEVLSRDAEGQHSLDKFNSMGRNSLSLDIFSPVSDGFKTHGFIGDTPTSRNGG
STDVFLREAEGQQSSEKFRVGRNSLDIFSPVRDDYKGHRLSDASSGKKDLDFLPQHGSAQ
RKNPLGTPGTRCYSPLSAVHTPPAIKEEEPVITSPTHTDTQINMVENNYPRQNVLTTPSA
AQTTHTQSVPSFNTPEPSQRPEVPTQLSYDSPVSSSQPKAESAASASNAVSSEAPLTSVQ
MNFVRNMIHEALEDFRDTCHRDIINLQVEMVRQFYIQLNEIHGLIERYSVNDSLVEEIEK
LREENKRLRANY
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggaggaggtgacccggttggtgtcatcaggtgactgcctgaagatctgggattccacc
tcgatgagtgtggtagagcagttcaaccctcacagtgccagccatcctctggcacaggtg
tgctggagcagcagcaatcagtacattgtcagtgccagcagtataggagacaagctggtg
gtgaccagcctgaagtcctctccagtgctagtgatggagcttgcagaagggaaaaaacag
acacgagttgcactaaattcaacgtcacagtttctggtcagtgggggactggataacacg
gtcaacatatgggacctgaagacaaagagattacatcgcagcctcaaggaccataaggag
gaagttacatgtgtgtccttcaatggtggtgatagttacatagtttcaggttcaaccagt
ggggacatcatcctccacagcattaccactaatctgtccagcaaggcttttggccatggg
ccaaatgagcctgtccatgacttgaagtactcactgataaagcggtctctcttggggagt
gtttcagacagtggttcagtggtactttgggatgcaaacacacagaaggaactgcacatg
tttgaaggagctcacaaagctcctgcctcaggcctggcattttccccagccaatgacctg
ctctttattacagttgggttagataagaggattgtctgttatgacacttccagcaaagtt
attttccgtagtaagcaggttgagtctccactaacggctgtagacttcactcctgatgga
gcagggcttgtagtgggctccacccatggacggatctacatgtatgacctgcgtaatcta
agcgctcctgtcaaaacaaccactgctcacaagacctcggtcacatgcatccgattccag
cactccaacaccagactaaagacgagtaaaacagtctctggcaagacttcttcgcagtcc
aacaagagaatctctgtaaagctggggcacaatcagcagagtggtcctcccactccaacc
tctttagttcctgctgtcccagaacagcagccagtaagccgaggagacggacaagctcac
agccttgggagtggcgcacgttctgaggtgctatccagagatgccgaaggccagcacagt
ttggataaattcaacagcatgggccgaaacagcctgagcctagacattttctcacctgta
tctgatggttttaaaacacatggcttcattggtgatactccaacttcaagaaatggaggc
agcactgatgtgttcttaagagaagctgaggggcaacagagttcagaaaagtttagggtt
ggtcgcaacagcctggacattttttctcctgttcgtgatgattacaaaggtcacagactc
agtgatgcttcaagtggtaagaaagatttagatttcttacctcagcacggttcagctcag
cgtaagaacccgctgggtacacctggtactcgctgctacagtcctctgtctgctgtccac
acaccacctgcaatcaaagaggaggaaccagtgatcacatcacctacacatacagacacg
caaatcaacatggtggagaataattatccaaggcagaatgttctgaccacaccctctgct
gctcagactacacacacccaatcagtgccttcattcaacactcctgagcccagtcaaagg
ccagaagtgccaacacagctcagctatgattccccagtgagtagcagtcaacccaaagct
gaatcggcagcaagcgcatctaatgctgtcagtagtgaagcaccactcacctcagtccag
atgaattttgtgcgcaacatgatccatgaagctctagaagatttcagagacacatgccac
agagatataatcaatctacaagtggaaatggttagacagttctacattcagctgaatgaa
atccatgggcttattgaaaggtactctgtaaacgacagtctcgtagaggagatagagaag
ctgcgggaggaaaacaaacgacttcgagccaattactaa

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