KEGG   Tachysurus fulvidraco (yellow catfish): 113636312
Entry
113636312         CDS       T08119                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113636312 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tfd04990]
    113636312 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:tfd04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   113636312 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 113636312
NCBI-ProteinID: XP_026992147
LinkDB
Position
4:18030143..18036870
AA seq 320 aa
MPVRIVMQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDSLVAIDGEPTEGM
THLEAQNKIKGCIEEMVLSIDRSESRMWSPLVSDDGKTHPYKMNLASESQEVKQIGSAHN
RSALPFSSPGPMVVTSQYNNPAGLYSSDNIKNFNSAVGGAKTTVTNESSNNPDLSKPVQN
KPLIAVDSEVYKMLNENQESNEPPRQSASFKVLQEILETGDPDKPSGFRSVKAPTTKIAS
SVGFTEKLHICDKCGSGIVGMFVKLRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYCEK
HARERVTPPEGYDVVTVFPK
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcctgtgcggattgtcatgcagggtcctggaccgtggggattcagattggtcgggggt
aaagacttcgaacagcctctgactatttcacgggtaaccccaggaagtaaagcagcccag
gccaacctctgtattggtgacagtcttgttgctattgatggagagcctacagagggaatg
actcacctggaagcccagaataagatcaagggttgcattgaggaaatggtgctctctata
gacagatccgaatcaagaatgtggtctccccttgtttctgatgatgggaagacgcatcca
tacaagatgaatctggcatcagaatcacaggaagtgaagcagattggttctgctcacaac
aggagtgctctcccgttcagttctccaggccccatggtggttacaagccagtataataat
ccagccggcttgtactcttctgataacatcaagaactttaacagtgctgttggtggtgcc
aagaccactgtgaccaacgaatcaagtaataatccagatctctccaagcctgtccagaat
aaaccattaattgctgttgactcagaggtgtataaaatgctgaatgagaaccaagagtcc
aatgagcctccacgtcagtctgcatcattcaaagtcctgcaggagattcttgagactggt
gatcctgacaaaccatctgggtttcgaagtgtgaaagctcccactacaaaaattgcttct
tctgtgggttttactgagaagctccacatctgtgacaaatgtggctcagggattgtggga
atgtttgtcaaactgcgagataagttccggcaccctgagtgctacgtctgcaccgactgt
ggaataaacctgaaacagaaaggacacttttttgtcgaggacaagatttactgtgagaaa
cacgcacgtgaaagagtcacacctcccgagggttatgatgtcgtcacagtcttcccaaag
tag

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