Tachysurus fulvidraco (yellow catfish): 113636312
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Entry
113636312 CDS
T08119
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113636312 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113636312 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113636312 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113636312
NCBI-ProteinID:
XP_026992147
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All DBs
Position
4:18030143..18036870
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AA seq
320 aa
AA seq
DB search
MPVRIVMQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDSLVAIDGEPTEGM
THLEAQNKIKGCIEEMVLSIDRSESRMWSPLVSDDGKTHPYKMNLASESQEVKQIGSAHN
RSALPFSSPGPMVVTSQYNNPAGLYSSDNIKNFNSAVGGAKTTVTNESSNNPDLSKPVQN
KPLIAVDSEVYKMLNENQESNEPPRQSASFKVLQEILETGDPDKPSGFRSVKAPTTKIAS
SVGFTEKLHICDKCGSGIVGMFVKLRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYCEK
HARERVTPPEGYDVVTVFPK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcggattgtcatgcagggtcctggaccgtggggattcagattggtcgggggt
aaagacttcgaacagcctctgactatttcacgggtaaccccaggaagtaaagcagcccag
gccaacctctgtattggtgacagtcttgttgctattgatggagagcctacagagggaatg
actcacctggaagcccagaataagatcaagggttgcattgaggaaatggtgctctctata
gacagatccgaatcaagaatgtggtctccccttgtttctgatgatgggaagacgcatcca
tacaagatgaatctggcatcagaatcacaggaagtgaagcagattggttctgctcacaac
aggagtgctctcccgttcagttctccaggccccatggtggttacaagccagtataataat
ccagccggcttgtactcttctgataacatcaagaactttaacagtgctgttggtggtgcc
aagaccactgtgaccaacgaatcaagtaataatccagatctctccaagcctgtccagaat
aaaccattaattgctgttgactcagaggtgtataaaatgctgaatgagaaccaagagtcc
aatgagcctccacgtcagtctgcatcattcaaagtcctgcaggagattcttgagactggt
gatcctgacaaaccatctgggtttcgaagtgtgaaagctcccactacaaaaattgcttct
tctgtgggttttactgagaagctccacatctgtgacaaatgtggctcagggattgtggga
atgtttgtcaaactgcgagataagttccggcaccctgagtgctacgtctgcaccgactgt
ggaataaacctgaaacagaaaggacacttttttgtcgaggacaagatttactgtgagaaa
cacgcacgtgaaagagtcacacctcccgagggttatgatgtcgtcacagtcttcccaaag
tag
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