Tachysurus fulvidraco (yellow catfish): 113636483
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Entry
113636483 CDS
T08119
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113636483 (synrg)
Membrane trafficking [BR:
tfd04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
113636483 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
113636483
NCBI-ProteinID:
XP_026992429
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Position
11:complement(5224725..5262409)
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AA seq
1343 aa
AA seq
DB search
MKMALRPGSGGGGSFMYPVGGGLGPPQGMMPMQQQQQQQQQQQQQGFPMVPVMQPNMQGM
MGMNFGPQMPAGAMPMQGGMAMGMQAPGMQFISQPQFMGMRPSGPQYPADLQKQMAEEHQ
KRLEQQQRMLEEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAK
MHPTPSAQSKKPDSSPSHSSVPPHSHSPAFAEDDDEFSDFIQGPVEASFPTSSLPLPSSS
SGANRSPLGAGPGQRPSSSPLPFSHAPSLPTLTVPHHSSVISSSQSTFQGPSLEEKLFSS
CDLTVDKKARVNFKPCQAMAELAAKAQVSVHFQCSSRARDWVQYPDDLSADFTLVKNPEP
PTASPDPTAAEAESHQASSASGVGVYPQQEMQSLLPAWLYNDSLVPEMFKKVLEFTMTPA
GIDTAKLYPILMSSGLPREALGQIWASANRTTPGKLTKEELYTVLALIGVAQSGLPAMSL
DILSQFPTPPVPNLPAMTMAMPAVLTHQQPIMPPASPAVMPMASNSLAQPSNSFIANFPP
VQGTKVDDDDFQDFQEAPKAGDDSFTEFQGETGGTFPIVTSSQSSIPAMLTPVSSSSTSS
TSDKYAVFKHMSVEHPTEPAAPVSDHGDKYSVFRELEHPSDRKPVGEGFADFKSVGADDG
FTDFKTANSTSPIDPPDQAKTFQPASFPLPFSSSHSLSQSQTHPTSLAQPKNPLNMSDLD
LFSSIAPPSTVDSKATCFSHSSSSSSALPSLLLPSAGPKPDDFGDFALFGSSSSSSSASE
AAASAQRGSGAGGAAAQDDFADFLSFGNPGKQPTESSKESDDFADFQSSKFQEKSLVDKM
AVFKQAKEDSASVKSLDLPSIGGSSVGKDDSEDALSVQLDMKLSDVAGELKHGASDSSLD
LPGLSSHQPPAADVDDLKFHPFGSSGISVLSSCDWSDKDDAPSGQGTKAQGVSVSVLPSS
ATLHKKETSFGSSENITHTTLEKVTTFPIEDAGFADFADFSSAQHAPREEEEDDFGDFAS
TVSEKSDAADAGLEATHPEVPEDFGAFQADKPKFGKSDFLKASAQPKAKSSEEMIKNELA
TFDLSVQGSHKRSHSLGEKEICTTPAPEQQFRDRSNTLSEKPALPVIRDKYKDLTGEVEE
SERYAYEWQRCLESAFQVIATANNTLNGISSSTVCTEVIQSAQGMEYLLGVVEVYRVARR
VELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLSPDESSLDFSSCILKHGIKNAK
ELACGVCLLNVDSRSKKKEENTFGRLFKKALTKDPGTKLTAFNSETDNFKLTYGGHQYHA
SCANFWINRVEPKPPGLILPDLL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcgctccggcccggatcagggggcggcggcagtttcatgtaccctgttgga
gggggacttggacctccacaaggaatgatgcccatgcagcagcagcagcagcagcagcag
caacaacaacaacagggatttcccatggtcccggtcatgcagcccaacatgcaaggaatg
atgggaatgaactttggaccccagatgccagctggagcaatgcccatgcagggtggcatg
gccatggggatgcaggcaccaggtatgcagttcataagtcagccgcagttcatgggaatg
aggccttcggggccccagtaccctgctgacctgcagaaacagatggctgaggagcaccaa
aagcgcttggagcagcagcagcgtatgctagaggaagatcggaagaggaggcagtttgaa
gagcagaagcagaaactgcgtctcctgagcagcgtcaaacctaaaactggagagaagagt
cgagatgatgcactagaagccataaaagggaatttagatggtttcagtagagacgcaaag
atgcaccccactccatctgctcaatctaagaaaccagactcatcgccatctcactcctct
gttcctccacattcccactcccctgcttttgcagaggatgatgatgaatttagtgacttt
atacaaggccctgttgaggcctcttttcccacttcctccctccctctgccctcctcttcc
tcaggtgccaataggtcacctttaggggcaggacctgggcagcggccctcttccagccct
ctccccttttcccatgctccctctctgcccacactcactgtccctcaccactcttctgtc
atctccagctcccaatctacatttcaaggcccctctctggaggagaagctcttctcctcg
tgcgatctaacagtcgataagaaggctcgggttaactttaagccctgccaggccatggcc
gagctggctgccaaagctcaggtttcagtgcacttccagtgtagctccagagctcgtgac
tgggtccaatacccagatgacctcagtgctgacttcacgttggtgaagaatcctgaacct
ccaactgcttccccagatcccacagcagcagaagctgagtcccatcaggcatcaagtgct
agtggtgttggtgtctatccccaacaagaaatgcagtccttgttgccagcctggctctac
aatgactctcttgttccagagatgttcaaaaaggttctggagtttacaatgaccccagca
ggcatcgacacagccaaactctaccccatactgatgtcatcgggtctgccccgagaggct
ctgggtcagatctgggcctcagccaatcgtaccacaccaggcaagctgaccaaggaggag
ctgtacactgtgctggccctgattggagtagcacagagtgggcttccagcgatgagtctg
gacatcctgagtcagttccctacccctccagtgcccaatttgcctgcaatgactatggca
atgccagctgtcctgacgcatcagcagcccataatgccccctgcctcgcctgctgtcatg
ccaatggcctccaactccctggcacaaccatccaacagcttcatcgccaatttcccacct
gtccagggaaccaaggtggatgatgatgatttccaggactttcaggaggcgccaaaagct
ggagatgattcgttcacagaatttcaaggagaaacaggaggaacgtttcccattgtaact
tcctcccaaagcagcattccagccatgctgactccagtctctagctcttcaacctcgtct
acctctgataagtatgcagtgtttaaacacatgtcagtggagcatccaacagaacccgca
gctcctgtctcagatcatggagacaaatacagtgtgtttagagagctggagcatccatca
gacaggaagccagttggggaaggttttgctgatttcaagtccgttggtgccgatgacggc
ttcaccgactttaaaacagccaacagcacttctccaatagaccctccagaccaggccaag
acattccaacctgcttcatttccacttcctttcagctcctctcactctctttcgcaatct
cagacccatccgacttccctggcacagcctaaaaaccctctaaacatgtcagacctggac
ctcttttcctccatagcgcctccttccactgttgactctaaagccacctgtttttcccat
tcctcctcctcttcctctgccttgccctcgctgctccttccttccgcaggccccaaaccc
gacgactttggtgacttcgcactctttggctcctcctcttcctcatcttctgcctctgag
gcagctgcctcagctcagagaggatccggagcagggggagctgcggcacaggatgacttc
gctgatttcctgtcgtttggtaaccctgggaagcagccgactgagagcagcaaggagagt
gatgactttgctgactttcagtcatccaaattccaagaaaaaagcttagtagacaagatg
gctgtcttcaaacaggccaaggaggactctgcttcggttaagtcgttggacctgccgtct
atcggaggcagcagcgtgggaaaagatgactcggaggatgctctctctgtgcagctggac
atgaagttatcagacgtggctggagagctaaagcacggtgcatctgacagttcattggac
ctgccaggcttgagctcccatcagccccccgccgcagacgtcgatgatctcaagttccat
ccattcgggagctctggcatcagcgtcctgtccagctgtgattggtccgacaaagacgat
gccccgtccggacagggcacgaaagcccagggagtctctgtgtctgtgctgccctcctca
gctacgcttcacaagaaggagacgtcattcggcagctcagagaacatcacgcacaccaca
ctagaaaaagtcaccacgttccccattgaagacgcagggttcgctgactttgcagacttc
agttctgcccagcatgcacccagagaggaagaggaggatgactttggtgacttcgccagc
actgtttcagaaaaatccgacgcagccgatgccggtcttgaggccacgcatcctgaggtg
ccggaggactttggtgctttccaggcagacaagcccaagtttggtaaatctgacttcctg
aaggcgagtgctcagccaaaagccaagtccagtgaggagatgatcaagaacgagctcgcc
acgttcgatttgtccgtgcaagggtcccataagcgcagtcacagtctaggggagaaggag
atctgcaccacacctgctcctgaacagcaatttcgcgatcgctcgaacaccttgagtgag
aaaccagcgctgccagtcatccgggacaagtacaaagatttaacaggagaggttgaggag
agtgagcgctatgcgtacgaatggcagaggtgcttggagagcgcttttcaggtgatcgcc
acagccaacaacacccttaatggtatcagcagttccaccgtgtgcactgaggtcatccag
tcagcacagggcatggagtacctgttaggtgtggtggaggtgtaccgtgtggccaggcga
gtggagctgggcatcaaggccacagctgtgtgctcagagaaactgcaagagctgctgaaa
gacatcagccgtgtgtggaacaacctcatgggcttcatgtctctggccaacctgtcacct
gatgaaagctccctggacttctcctcctgtatcctgaagcatggcatcaagaatgccaag
gagctggcgtgtggagtgtgtctgctcaacgtggattcacgcagcaagaagaaagaggag
aacacgttcggacgtctctttaaaaaagcactgacaaaagacccgggcacaaagttaacg
gcttttaactccgagacagataacttcaagctgacgtacggcgggcaccagtaccacgcc
agctgcgctaatttctggattaaccgcgtagagcccaagcctcctggcctcatccttcct
gacctgctgtga
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