Tachysurus fulvidraco (yellow catfish): 113636661
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Entry
113636661 CDS
T08119
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113636661 (lingo1b)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113636661 (lingo1b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
113636661
NCBI-ProteinID:
XP_026992698
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All DBs
Position
1:8832134..8847600
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AA seq
621 aa
AA seq
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MTFLVTSRMVAGVVSGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVLCHR
RKLVALPEGIPIETRLLDLSKNRLKAINPEEFISYPHLEDLQLNENVISVIEPGAFSNLF
GLRTLGLRNNRLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDSEL
VFISHRAFHGLSSLEQLTMERCNMTSVPTEAFNHLHTLLVLKLWHFNVNIIRDFSFKRLY
RLKLLEITNWPFLEILTDKSLHGLNITTLSITHCNLTAIPYMAIQHLVYLRSLNFSFNPI
ETVEGNKLHNLMRLQVFDLVGGRLVTIEPYSFRGLNYLKVLNISSNSLSTLEESAFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPSCLSPEFVQGKEFKDFPDILPSNYF
TCQKSKIRDHKPLQRFVDEGTTVRFACQADGDPTPVIMWQSPRKQFITTKTVGRLSVSLD
GTLEVRYAQIQDNGTYTCIATNAGGNDTKLAHLHVHSYSPNWPHQSNKTFAFISNQPNDS
GANDTGRSVQFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYVP
RRVEGQTSPTEETHKIRMKMM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctggtaaccagcagaatggtggctggcgtggtgagtgggcacagctacctg
gtggcatgctggcagcccattcttatcctgatgctgggcactgtgctgtcgggttccact
acaggatgcccttcccgctgtgaatgcaatgcccaggagcgctctgtattgtgccaccgc
agaaagctggttgcccttccagagggaatccctattgagacgagactattggacctgagc
aaaaatcgcttgaaagccatcaacccagaggagttcatcagctatccccacctggaggac
ctgcagcttaatgagaatgtcatctcagtcatcgagccaggtgcattcagtaatctgttt
ggattacggacgttaggactgcgcaacaacagactgaagctcattcagctaggtgtattt
actggtttgagtaacctcaccagactggatattagtgagaataaaatagttatcttgttg
gattacatgtttcaggacctttacaatctaaaagaactggaagtgggagatagtgagctg
gtcttcatctctcatagagcctttcatggactcagtagtttagagcagctcaccatggag
aggtgcaacatgacctccgtgcccacggaggccttcaaccatctccataccctgttggta
cttaagttgtggcattttaatgtgaacatcattagagatttttctttcaagagactctat
cggctgaaattgttagagataacaaattggccctttcttgaaatcttgaccgataagtcc
ctccatggcctcaacattaccacactgagcatcacacattgcaacctcactgccataccc
tacatggccatccagcaccttgtctaccttcgctctctcaacttttcattcaatcccata
gagactgtggagggcaacaaactgcacaacctgatgaggctgcaagtattcgacttagta
gggggtcgattggtcactattgagccttactctttcagaggactaaactatcttaaggtt
ctcaacatttcaagcaatagcttgagcactttagaagagtctgcctttcactcagtcggt
aatcttgagaccctggccctatatgacaaccccttggcatgtgactgccgcttgttatgg
gtttttcgccgccgctggaggctcaatttcaacaagcagcagccatcctgcttgtcccct
gagtttgtgcaaggaaaggagtttaaagatttcccggatattctcccttcgaattatttt
acttgtcagaaatctaagatccgggaccataaaccccttcagagatttgtggatgaaggg
accacagttcgttttgcatgccaagctgatggggatccaacccctgtgatcatgtggcag
tctcctcggaagcaattcatcaccaccaaaacagttggacgtctgtcagtttctctggat
ggcaccctggaagtacgatatgcccaaatacaagacaatggcacctatacatgtattgcg
accaatgcagggggtaatgacaccaaacttgctcatctacatgttcatagttattcaccc
aactggccccatcagtctaataagacatttgctttcatctccaaccagccaaatgatagt
ggtgccaatgacactggtagatcagtccaatttccatttgatatgaagacgcttatcatt
gctactactatgggatttatttctttccttggagtggtattgttttgtcttgtactcctc
tttctttggagtcgggggaaaggtaatgccaagccaaacatcgaaattgagtatgtgcca
cgtagagtagaagggcagaccagtccaactgaggaaacccataagatcagaatgaaaatg
atgtaa
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