Tachysurus fulvidraco (yellow catfish): 113636689
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Entry
113636689 CDS
T08119
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113636689 (irx5a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113636689 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
113636689
NCBI-ProteinID:
XP_026992731
LinkDB
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Position
1:4878502..4881953
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AA seq
449 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFSSASAA
YSSHLPYGADAAAAAATFTSYVSSPYDHTSGMPGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPNKPIDKGDSTDTETDSKILHVGEATCDRFQDDHHGKD
SDPLLSDSDLKETDERADALVNPSKATTSSPSLVQRAHELNVHDRPPEVAHGASVVNHSN
ATSVIHSPPSAPKPKLWSLAEIATSSDRCRGGGGGDAGGTAQSALPAASAASPSRTSTQC
ALPSGAVLSRPLYYTSPFYAGYTNYGSFGHLHGSHGSVTSSAATHFNGISPSVLNRAEAL
ARESKARSQAQVDLCKDSPYELKKGMSNI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcaaccgtccgcctctttggcgctctactcgtgc
ccagcgtacagcacgagtgtaatctcgggcccgcgcacagaagagctcggtagatcgtct
tcaggctcggcatttgcaccctacgccggatccacggcgttcagcagcgcctcagctgcc
tacagctcgcatctgccatacggagcggacgccgcagccgccgcggccactttcacctct
tacgtgagttccccctatgatcacacgtcaggcatgcctggatctatcggttatcacccg
tacgcagcaccactgggttcatacccgtacggtgaccctgcgtaccgtaagaatgcgacc
cgggacgccaccgcgactctgaaggcctggctcaacgagcaccgcaagaacccgtatccc
accaagggcgaaaagatcatgctggccatcattaccaagatgacccttacccaggtgtcc
acctggttcgccaacgcccggaggagactgaagaaggagaacaagatgacctggacgccg
cgcaacaggagcgaggacgaggaggaggacgagaacatcgacctggagaaaaatgacgac
gacgagcctaacaagcctattgacaagggagactcgacagacacggagacagattccaaa
atcttgcacgtgggcgaggcgacgtgcgacagatttcaagatgaccaccacggcaaagac
tcggaccctttgctcagcgactcggacttgaaggagactgacgagcgcgcggacgcactc
gtgaacccttcaaaagccaccacgtcgtcgccgtcgcttgtgcagcgggcccacgagctt
aacgtgcacgacaggccgccggaagttgcacacggtgcctccgtagtcaatcacagcaac
gctacgtccgttatccattctcctccgtctgcgcccaaacctaaactgtggtctctggcg
gaaatagccacgtcctcagacaggtgcagaggaggaggaggcggcgacgcagggggcaca
gcccagagcgctctaccggcagccagcgccgcgtctccgagccggacctcgacgcagtgc
gcgctcccgagtggcgccgtgctctcccggcctctctactacacgtcgccgttttacgcg
ggctacacgaactacggctcttttggccacctgcacggcagccacggctccgtcacgagc
tcggcagcgacgcacttcaacggaataagtccgagcgttttaaaccgagccgaagctctt
gcccgagaaagcaaagcaaggagccaagcgcaggtagacctgtgtaaagactctccctat
gaactcaagaaaggtatgtccaacatttaa
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