Tachysurus fulvidraco (yellow catfish): 113636962
Help
Entry
113636962 CDS
T08119
Name
(RefSeq) integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
tfd04518
Integrin signaling
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113636962
04517 IgSF CAM signaling
113636962
04518 Integrin signaling
113636962
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113636962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113636962
04515 Cell adhesion molecules [BR:
tfd04515
]
113636962
04090 CD molecules [BR:
tfd04090
]
113636962
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113636962
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin alpha subunits
113636962
CD molecules [BR:
tfd04090
]
Proteins
113636962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
ITGAX-like_Ig_3
FG-GAP_3
Integrin_alpha
ACT_ACR9_3rd
vWA_Rv0959
CagY_M
Motif
Other DBs
NCBI-GeneID:
113636962
NCBI-ProteinID:
XP_026993126
LinkDB
All DBs
Position
18:complement(20666213..20699942)
Genome browser
AA seq
1188 aa
AA seq
DB search
MSLYTHTHTHTHTHTHTHTHTQTEGSTDWRMALLILLFCAVSLSDGFNIDVLKLDEFSGN
EESFFGYKLLQYQSKETKQIIVSAPLSANRSGAIFKCPVEKNECTQFFKPKPDLKTIRFF
GMSLAVRTFPSSTLTSCSPSVTHECDGNSYLNGICYQFNSSLDFTTSFTPAFQECSKSKV
NLVFLFDGSQSMQESDFNKNKHFIWDIMTNLKNSSIEFAAVQFSFSFETVFTFKDYVNNE
AKKKLDEEKHMKSLTNTHGAIRYVLKELFDNSESGADPEATKALVIITDGSPTDISNGEI
QRCESRGITRFVIGVGAVSLENLKSLGSKPNDNYIFMIKDYDGLKGLLDKLQNKIYAIEG
AKGRKFRKEVSQSGFSAASDKDSLILGAVGGNDWSGALYEVQGTRNDEKEFKGFQFNPDS
YNGYAVVVGQRDSVSLVFSGAPRSNHRGQVTLFKKMSNEWVALRNISGEQIGSYFGGSLC
LLDLDSDNNTDFLVVGAPLYYNHHPQLEGRVYIYNLTQKLEMKTVLEVSGSPQGRFGMTL
AAVADLNGDQKQDLAVGAPLEDNHKGAIYIYLGDPEHGIRSQYSQKIVASSLSMKLRHFG
LAIDGVMDMGQDGLTDIAVGAKGTVLLLKSRPVVSVSAKFSFSPSEINLTHFDCLNNLEN
PTDKNKVITLNTCFIMTENTNSKGAVSNLNISWVLIADAVRQDSRAFFNKEDKTSRNLTK
SMMLGLNMSCSSDEVYMQRCVRDTVSPVLFRLNFKQSDPQKSTSILNIDSKTTAFVEVPF
QINCKNTSCVSDLLMDFNFLDSTLLVVDQASFIIRVTLTNKGDDSFNTSLVLLYPPGLSL
SMFKTIKPHRRVLSSCGDRDEGALNKTTCSISLPVYPRNMNAEFEGIFRISRFYNWKESM
QMTLVISSDNNGNTSKSTVMKTLPVQFSVNVAISIVPEESLTYLNFSLEDKEMKPLRVVY
KVSNLDVKGVPVSVSFWMPSQSGVNLYDLHNFSISVSENATYCTSITEGPVECPVENCVF
FKCAPFLLDPVSDVRFNWSTLVSFPNKQNYTGNFIFSEFKEEDEFSVSAQLDFDKKLYRQ
VSSGRENDTIIFHHTMMTLKLELVIPPDVIAISVGSGFLGFLLLIIIFVLLLKCGFFKRK
HPEFFEEGNENRSEGEDEGCSADTNGKPGQSSSTAEEKPFIPVSQNVE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttacacacacacacacacacacacacacacacacacacacacacacacacac
acacagacagagggttctactgactggaggatggcgttacttatcctacttttctgcgct
gtctcactctctgatggatttaacattgatgtgttgaagttagacgaattctcaggaaat
gaagagagtttttttggatacaaattgctgcagtatcagtctaaggagacgaaacaaatt
atagtaagtgccccactgagtgccaacagatcaggagctatttttaaatgcccggtggag
aagaatgaatgcacccagttttttaaacctaaaccagacttgaagacgatcaggttcttc
gggatgtcgctggcagtgaggacgtttccatcatccacactcactagttgcagtccgagt
gtcactcatgagtgtgatggaaactcatatctgaatggaatctgttaccagttcaacagc
agtctggatttcaccaccagtttcacccccgctttccaagaatgcagtaagagtaaagtc
aacctggttttccttttcgacggttctcaaagcatgcaggaatctgacttcaataagaac
aaacacttcatatgggacattatgacaaatctcaaaaactcatctatcgagtttgctgct
gttcagttttctttcagcttcgagacagttttcacctttaaagattatgttaacaatgag
gcaaagaagaaacttgatgaagaaaaacacatgaagtcactcacaaacacacacggtgcc
atcagatacgtccttaaagaactgtttgataactcggagtctggtgcagatcctgaggct
actaaagccctggtcatcatcacagacggaagtcctactgatatctcaaatggtgagata
cagcgctgtgagtcacgtggcatcactcgctttgttatcggggtgggagctgtaagtctt
gagaatctgaaaagtcttggctcaaagccaaatgacaactatatcttcatgattaaagac
tatgatggactaaaaggacttttggataaattgcaaaataagatctacgccatcgaggga
gccaagggcaggaaatttaggaaagaggtgtctcagagtggattcagtgctgccagtgat
aaggacagtctcattctgggagcagttggaggtaatgattggagtggagcactgtatgag
gtgcaaggaaccaggaacgatgaaaaggaattcaaaggtttccagttcaatccggattca
tacaacggttacgctgtggtggttggacagagagacagcgtttctcttgtgttctctgga
gcaccaagatctaatcacaggggtcaggtgactctgtttaaaaagatgtctaatgagtgg
gtggctttgaggaacatttctggtgaacaaatcggctcttatttcggaggatcgttgtgt
ttgttagacctggattcagacaacaacactgacttccttgtggttggagccccactgtat
tataatcatcatccacagttagagggacgggtttacatctacaatctcacacagaagctg
gaaatgaagacggtgttggaggtgtctggatcacctcagggtcggtttgggatgactcta
gctgctgtagcagatctaaatggagaccagaagcaggatttagctgttggagctccactg
gaagataatcacaaaggagccatttacatttaccttggcgaccctgaacatggcatccgc
agccagtacagccagaaaattgtggcaagctctctctctatgaagcttcgacatttcggt
ctggcgattgacggtgtgatggacatgggacaggatggtctgacggacatcgctgttgga
gcaaaaggaaccgttttactcttgaaatctcggccggttgtgtccgtctcagcgaagttc
agtttctctccatctgaaataaacctcactcacttcgactgcctcaacaacctggaaaat
cccactgacaaaaataaagtcatcaccctgaacacctgctttattatgactgagaacacc
aacagcaaaggggcagtgagtaatctgaacatatcatgggtgctcattgctgatgctgtg
agacaggacagtcgggcatttttcaataaggaagataagacgtccaggaatctaacaaag
tccatgatgctgggcttgaacatgtcctgttccagtgacgaggtctatatgcaaaggtgt
gtaagggacacggtgtctcctgtattgttcagactcaacttcaaacagtctgatcctcag
aagtccacttccatcttgaacattgacagcaagaccacagcttttgtagaggttcccttt
cagataaactgcaaaaacacaagttgtgtatcagacttgctgatggactttaacttcctg
gacagcacattgctggtggtggaccaagcatcttttatcatccgtgtgactttaacgaat
aaaggagatgactccttcaacaccagtttggttctgctctaccctcctggattatctctc
tcaatgttcaagaccattaagccacacagaagggttctgagcagttgtggagatcgtgat
gaaggagctctaaataaaaccacctgcagtatcagtttaccggtgtatcccagaaacatg
aatgccgagtttgagggtatattccgcatctctcgcttttacaactggaaagagagcatg
cagatgacacttgtgatcagcagcgataacaatggaaatacaagtaagtccacagtgatg
aaaactctgcctgttcagttcagtgtaaacgtggccatcagcattgttcctgaggaatca
ctaacatatctgaacttctccctggaagataaagaaatgaagcctctcagggttgtgtat
aaagtgagtaatctggatgtcaaaggtgtgcctgtgtcagtaagcttctggatgccttct
cagtctggtgtaaacttgtacgatctgcacaatttctccatcagtgtgtcagagaatgct
acctactgtaccagcatcactgaaggacctgtggagtgtccagttgagaactgtgtattc
ttcaagtgtgctcctttcttattggatcctgtttctgatgtccggtttaattggagcact
ctcgtctccttccctaataaacaaaattatacagggaatttcattttcagtgagtttaag
gaagaggacgaattttctgtttctgctcagctggactttgataaaaagctgtatcgtcag
gtttccagtggcagagaaaatgacaccatcatatttcaccacactatgatgactctgaaa
ttagagctggtaattcctcctgatgtaatagcaatcagtgtgggaagtggatttctcgga
tttctcctgctcatcatcatatttgttctgctgttaaagtgtggattctttaagcgtaaa
caccctgaattctttgaagaagggaatgagaacagaagtgagggagaagatgaaggctgc
agtgctgatacaaacggaaagccaggacaatcttcttccacagctgaagagaaaccgttt
attcctgtgtcacaaaatgtagagtga
DBGET
integrated database retrieval system
