KEGG   Tachysurus fulvidraco (yellow catfish): 113636996
Entry
113636996         CDS       T08119                                 
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4
  KO
K10876  RAD54-like protein 2 [EC:5.6.2.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113636996 (rad54l2)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     113636996 (rad54l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII ERCC3_RAD25_C AAA_22 HDA2-3
Other DBs
NCBI-GeneID: 113636996
NCBI-ProteinID: XP_026993184
LinkDB
Position
2:18190609..18205581
AA seq 1398 aa
MSEEAISESDLEHSLNSEEEEEEQMGEEGDGENDAADGDDEEEEEEDEEAEHSAEAMETE
EGACLSSPTHSSRSGSSDLSSRPQSRSSSKSTSRPSSPSGSHGASVATGSAPKRKSKKKS
SKPAKPAHLRRNIRKLLEEHQLEPGTKAAQQEELERRKRLEQQRKDYQLPTVELPSLATV
IKGEVICLDSSGDEGDSRGSVPPPKPAPRDDVIELSSGDEDTFQISEEDDERSTSPGTEE
SSGSHINDALNQPDAQGSVLVNINHPAEEPDLFLPPQLARVVKPHQIGGIRFLYDNLVES
LERFNTSSGFGCILAHSMGLGKTLQVISFIDILLRHTGASTVLAIVPVNTLQNWLAEFNL
WLPSAEALPPDSDPAQVSPRTFRVHLLNDEHKTTVTRAKVIEEWTRDGGVLLMGYEMYRL
LSLKKSFVTGRKRKSKKPVGPIIIDLDEEDRQQELMKDIEKALSQPGPDVVICDEGHRIK
NCHASTSQALKNIRSRRRVVLTGYPLQNNLMEYWCMVDFVRPDFLGTRQEFSNMFERPIL
NGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLSTQLPIKQEHVILVRLSPLQRA
LYKEFMNRFREAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENQANEQDLDLEDLN
ASATSRCTAPGLKGKTSDCSGTKGTLAPLQERANQVITYEWAKDIMSGYHTGVLENSAKM
VLLFHLIEESVSKGDKILVFSQSLSTLSVIESFLAVRTMPIKMDNQKQNWLRGINYYRLD
GSTSASERERLINQFNDPANTTTWVFLLSTRAGCLGVNLIGANRVVVLDASWNPCHDAQA
VCRVYRYGQHKPCYIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPVLTFTRKEVESL
LHYVEEEPDPSQSLLPKDDMESVIKQACLCYPHLITKPPFQHESLLMDRKDLKLTKAEKK
AAKKSYEDEKRASVPYQRPSYAHYYPANEQSLSNIRNWRPTPRMDEKPIASVRPVQSTPI
PMMPRQAVVGGHASGPAFPVNYLQKAGVLVQRVITTTDIVIPGTNSSTDVQARISAGESI
HVIKGSKGTYIRTNDGRIFAIRSGKPRASDGASAATREVGGSLLRSVSNGRVSPPELKRF
SPDGMRHVSPSSSPNLLHQIHHYTPGPTNELALPDLTPRPTQHGLSSEPQRSDVIGSGSA
LDIQSLKRKLLSDSRGSKRSTSTTAAANFPAFPVSGGYNMGSMGFPPALLGALGHMTPPL
VGGTNRGQFRNDLQSMLPTNALSSSHGSSSSTAIASSSSAPPSSSSSSAIPPFLFNSSMA
NMLSGFSMPFTSPLLQDSPRMFSNSLSSSSSGSTPAAPSFLSPSSLLGAALSRPDTRHTL
AENGGSSSDDDVIEVMGQ
NT seq 4197 nt   +upstreamnt  +downstreamnt
atgtcggaagaggcgatctcagagagcgacctggagcatagcctgaatagtgaagaggag
gaagaagagcagatgggagaggaaggtgacggagagaacgacgcagctgacggcgacgat
gaagaagaagaagaggaggacgaagaagcagagcacagtgcagaggccatggagaccgag
gagggggcatgcctctcaagccccacccattcgtcacgttcagggagctccgacctatcc
tccagacctcaatcacggtcctcatcaaagtccacctcgcgtccttcgagtccatctggg
tcacatggggcctctgtggccacaggctccgcccccaagaggaagtcaaagaagaaaagc
tccaaacctgctaaacctgctcacctgaggagaaacatcaggaagctgctggaggagcat
caactggaaccaggaacaaaagcagcacagcaggaggagctggagaggagaaaacgcctg
gagcagcagaggaaggactatcagttacccactgtggaactgccctccttggcaactgtt
attaagggtgaggtgatttgcctggacagcagcggagatgagggagattccagaggttct
gtacctcctcctaaacctgcacccagagacgacgtgatcgagctgagttcgggtgacgag
gacactttccagatcagtgaggaggatgacgagcgctcaacttcacccgggacagaggag
agcagcggctcgcacatcaacgatgccctgaaccagccggacgctcagggcagcgtgctg
gtcaacattaaccaccctgccgaggagcccgacctgttcctccccccgcagctcgctcgt
gtcgtcaaacctcaccagatcggtgggatccgatttctctacgataacctggtggagtct
ctggagcgctttaacaccagcagtgggttcggctgcatcctagcacacagtatgggattg
gggaaaactctgcaggtcatctcctttatcgacatcctgctccgacacacaggagcctcg
accgtcctcgccatcgtgcctgtgaacactctgcagaactggttagccgagtttaacctg
tggttgccttcagctgaggcccttcctccagacagcgatccggcacaggtttcccccaga
accttcagagtgcacctcctgaatgacgagcacaagacgacggtgacccgtgcgaaggtg
atagaggagtggacgcgtgatggcggcgtgctgctgatggggtatgaaatgtatcgcctc
ctctctctgaagaagagcttcgtcaccggccgcaagaggaagtctaaaaaaccagtcggg
ccgatcatcatcgacctggacgaggaggaccggcagcaggagctcatgaaagacatcgag
aaggcgctctctcagcccgggccggacgtggtgatctgcgacgagggtcaccgaataaag
aattgtcacgccagcacgtcgcaggctctgaagaacatcaggtctcggcggcgtgtggtg
ctgaccggctacccgctgcagaacaacctgatggagtactggtgcatggtggacttcgtg
cggcccgacttcctgggcacgcggcaggagttcagcaacatgttcgagcgacccatcctg
aacggccagtgtatcgacagcacgccgcaggacgtcaggctcatgaggtaccgcagccac
gtcctgcacagcctgctcgagggcttcgtccagagacgcggtcatgatgtgctcagcact
cagctgcccattaaacaggagcacgtgatcctggtgcgtctctctcctctccagagggcg
ctttataaagagtttatgaaccgtttccgtgaggcggggaacagcggctggctcggtctc
aatccgctcaaagccttctgtgtgtgctgcaagatctggaatcatcctgacgttctgtat
gaagctctgcagaaggagaaccaggctaacgagcaggacctggaccttgaagacctgaac
gcctccgcgacatcccgatgcaccgccccggggttaaagggcaagacctctgactgctct
ggcactaaggggacactcgcacctctgcaggaacgagccaatcaggtcatcacctacgaa
tgggcgaaggacataatgagcggataccacaccggcgtcctggagaactccgctaagatg
gtgttgctcttccatctgatcgaagagagcgtcagcaaaggggacaaaatcctcgtcttc
agtcagagtttgtccacattgtcggtgattgagtccttcctggctgttagaacgatgccc
atcaaaatggacaaccagaagcagaactggctccgtggcatcaactattacaggttggat
ggcagcacgtctgcttcagagagagagagactcatcaaccagtttaacgacccagcaaac
accacgacctgggtcttcctcctgtccaccagggcggggtgtttgggcgtgaacctgatc
ggggcgaatcgggtcgtggtgctcgacgcttcgtggaacccgtgccatgatgcacaggcg
gtttgtcgagtatatcgttatggccagcacaaaccctgttacatctacagactggtgtgt
gacttcaccctggagaagaagatctacgatcgtcaggtgtccaagcagggcatgtcagac
cgtgtggtagatgacctgaaccccgtcctcaccttcacccgtaaggaggtggagtctctg
ctgcactacgtggaggaggagcctgatcctagccaatcactgctgcctaaagatgacatg
gagtcagtaattaaacaggcctgtctgtgttatcctcacctcatcaccaagccccctttc
cagcacgagtctttgctgatggaccgcaaggacctgaaactcaccaaagcagagaagaaa
gccgctaagaagagttatgaggatgagaagagggcatctgtaccctaccagcgcccgtcc
tacgcccactattaccctgccaacgagcagagcctctctaacatcaggaactggaggccg
acgccgcggatggacgagaagcccatcgccagcgtgagacccgtccagtccacgcccatt
cccatgatgcctcgccaggctgttgtgggtggccacgcctccggccctgccttccctgta
aactacctgcagaaggccggtgtcctcgttcagcgtgtcattactaccactgatatcgtg
attcccggcactaacagctcgacagacgtgcaggcgaggatcagtgctggagagagcatc
cacgtcatcaaaggttctaaaggtacatacatcaggactaatgatggacggatctttgcc
attcgttctggaaaacccagagccagtgatggagcttctgcagcaactagagaagtgggc
ggttctctcctgcgctcggtcagtaacggccgcgtgtctcctccggagctgaagcgcttt
tctccggatggcatgcgccacgtgtctccgtcctccagccctaacctgctgcaccagatc
catcattacacacccggccctaccaacgaactcgcgctccccgacctcacgccccgcccc
acccagcacggcctctcctccgagcctcagcgtagtgacgtcatcggatctggctccgcc
ctcgacatccagagtctgaagaggaaactcctttcagactctcgaggttccaaaaggtcc
accagcacaacagccgctgctaatttcccagcgtttcccgtgagcggcggctacaacatg
gggtccatgggatttcccccggcccttctgggggctttgggtcacatgacaccacctctg
gttggcggcacaaatcgaggtcaatttcggaacgatttgcaaagcatgttacccactaat
gctttaagctcctcccacggttcctcttcatccaccgccatcgcttcgtcatcctctgcg
cctccgtcatcctcctcctcctccgctatcccaccgttcctctttaattccagcatggcg
aacatgctgtctgggttttccatgcccttcacttcgcctcttctacaggactctccaaga
atgttctccaattctctgtcctcgtcctcatccggctccacccctgccgctccctccttc
ttgtcaccctctagcctgctgggggcggcgctgagtcgacccgacacgcgccacacgctc
gccgagaacggtgggagtagctctgacgacgatgtcatcgaggtgatggggcagtga

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