Tachysurus fulvidraco (yellow catfish): 113636996
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Entry
113636996 CDS
T08119
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113636996 (rad54l2)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113636996 (rad54l2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
HDA2-3
Motif
Other DBs
NCBI-GeneID:
113636996
NCBI-ProteinID:
XP_026993184
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All DBs
Position
2:18190609..18205581
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AA seq
1398 aa
AA seq
DB search
MSEEAISESDLEHSLNSEEEEEEQMGEEGDGENDAADGDDEEEEEEDEEAEHSAEAMETE
EGACLSSPTHSSRSGSSDLSSRPQSRSSSKSTSRPSSPSGSHGASVATGSAPKRKSKKKS
SKPAKPAHLRRNIRKLLEEHQLEPGTKAAQQEELERRKRLEQQRKDYQLPTVELPSLATV
IKGEVICLDSSGDEGDSRGSVPPPKPAPRDDVIELSSGDEDTFQISEEDDERSTSPGTEE
SSGSHINDALNQPDAQGSVLVNINHPAEEPDLFLPPQLARVVKPHQIGGIRFLYDNLVES
LERFNTSSGFGCILAHSMGLGKTLQVISFIDILLRHTGASTVLAIVPVNTLQNWLAEFNL
WLPSAEALPPDSDPAQVSPRTFRVHLLNDEHKTTVTRAKVIEEWTRDGGVLLMGYEMYRL
LSLKKSFVTGRKRKSKKPVGPIIIDLDEEDRQQELMKDIEKALSQPGPDVVICDEGHRIK
NCHASTSQALKNIRSRRRVVLTGYPLQNNLMEYWCMVDFVRPDFLGTRQEFSNMFERPIL
NGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLSTQLPIKQEHVILVRLSPLQRA
LYKEFMNRFREAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENQANEQDLDLEDLN
ASATSRCTAPGLKGKTSDCSGTKGTLAPLQERANQVITYEWAKDIMSGYHTGVLENSAKM
VLLFHLIEESVSKGDKILVFSQSLSTLSVIESFLAVRTMPIKMDNQKQNWLRGINYYRLD
GSTSASERERLINQFNDPANTTTWVFLLSTRAGCLGVNLIGANRVVVLDASWNPCHDAQA
VCRVYRYGQHKPCYIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPVLTFTRKEVESL
LHYVEEEPDPSQSLLPKDDMESVIKQACLCYPHLITKPPFQHESLLMDRKDLKLTKAEKK
AAKKSYEDEKRASVPYQRPSYAHYYPANEQSLSNIRNWRPTPRMDEKPIASVRPVQSTPI
PMMPRQAVVGGHASGPAFPVNYLQKAGVLVQRVITTTDIVIPGTNSSTDVQARISAGESI
HVIKGSKGTYIRTNDGRIFAIRSGKPRASDGASAATREVGGSLLRSVSNGRVSPPELKRF
SPDGMRHVSPSSSPNLLHQIHHYTPGPTNELALPDLTPRPTQHGLSSEPQRSDVIGSGSA
LDIQSLKRKLLSDSRGSKRSTSTTAAANFPAFPVSGGYNMGSMGFPPALLGALGHMTPPL
VGGTNRGQFRNDLQSMLPTNALSSSHGSSSSTAIASSSSAPPSSSSSSAIPPFLFNSSMA
NMLSGFSMPFTSPLLQDSPRMFSNSLSSSSSGSTPAAPSFLSPSSLLGAALSRPDTRHTL
AENGGSSSDDDVIEVMGQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaggcgatctcagagagcgacctggagcatagcctgaatagtgaagaggag
gaagaagagcagatgggagaggaaggtgacggagagaacgacgcagctgacggcgacgat
gaagaagaagaagaggaggacgaagaagcagagcacagtgcagaggccatggagaccgag
gagggggcatgcctctcaagccccacccattcgtcacgttcagggagctccgacctatcc
tccagacctcaatcacggtcctcatcaaagtccacctcgcgtccttcgagtccatctggg
tcacatggggcctctgtggccacaggctccgcccccaagaggaagtcaaagaagaaaagc
tccaaacctgctaaacctgctcacctgaggagaaacatcaggaagctgctggaggagcat
caactggaaccaggaacaaaagcagcacagcaggaggagctggagaggagaaaacgcctg
gagcagcagaggaaggactatcagttacccactgtggaactgccctccttggcaactgtt
attaagggtgaggtgatttgcctggacagcagcggagatgagggagattccagaggttct
gtacctcctcctaaacctgcacccagagacgacgtgatcgagctgagttcgggtgacgag
gacactttccagatcagtgaggaggatgacgagcgctcaacttcacccgggacagaggag
agcagcggctcgcacatcaacgatgccctgaaccagccggacgctcagggcagcgtgctg
gtcaacattaaccaccctgccgaggagcccgacctgttcctccccccgcagctcgctcgt
gtcgtcaaacctcaccagatcggtgggatccgatttctctacgataacctggtggagtct
ctggagcgctttaacaccagcagtgggttcggctgcatcctagcacacagtatgggattg
gggaaaactctgcaggtcatctcctttatcgacatcctgctccgacacacaggagcctcg
accgtcctcgccatcgtgcctgtgaacactctgcagaactggttagccgagtttaacctg
tggttgccttcagctgaggcccttcctccagacagcgatccggcacaggtttcccccaga
accttcagagtgcacctcctgaatgacgagcacaagacgacggtgacccgtgcgaaggtg
atagaggagtggacgcgtgatggcggcgtgctgctgatggggtatgaaatgtatcgcctc
ctctctctgaagaagagcttcgtcaccggccgcaagaggaagtctaaaaaaccagtcggg
ccgatcatcatcgacctggacgaggaggaccggcagcaggagctcatgaaagacatcgag
aaggcgctctctcagcccgggccggacgtggtgatctgcgacgagggtcaccgaataaag
aattgtcacgccagcacgtcgcaggctctgaagaacatcaggtctcggcggcgtgtggtg
ctgaccggctacccgctgcagaacaacctgatggagtactggtgcatggtggacttcgtg
cggcccgacttcctgggcacgcggcaggagttcagcaacatgttcgagcgacccatcctg
aacggccagtgtatcgacagcacgccgcaggacgtcaggctcatgaggtaccgcagccac
gtcctgcacagcctgctcgagggcttcgtccagagacgcggtcatgatgtgctcagcact
cagctgcccattaaacaggagcacgtgatcctggtgcgtctctctcctctccagagggcg
ctttataaagagtttatgaaccgtttccgtgaggcggggaacagcggctggctcggtctc
aatccgctcaaagccttctgtgtgtgctgcaagatctggaatcatcctgacgttctgtat
gaagctctgcagaaggagaaccaggctaacgagcaggacctggaccttgaagacctgaac
gcctccgcgacatcccgatgcaccgccccggggttaaagggcaagacctctgactgctct
ggcactaaggggacactcgcacctctgcaggaacgagccaatcaggtcatcacctacgaa
tgggcgaaggacataatgagcggataccacaccggcgtcctggagaactccgctaagatg
gtgttgctcttccatctgatcgaagagagcgtcagcaaaggggacaaaatcctcgtcttc
agtcagagtttgtccacattgtcggtgattgagtccttcctggctgttagaacgatgccc
atcaaaatggacaaccagaagcagaactggctccgtggcatcaactattacaggttggat
ggcagcacgtctgcttcagagagagagagactcatcaaccagtttaacgacccagcaaac
accacgacctgggtcttcctcctgtccaccagggcggggtgtttgggcgtgaacctgatc
ggggcgaatcgggtcgtggtgctcgacgcttcgtggaacccgtgccatgatgcacaggcg
gtttgtcgagtatatcgttatggccagcacaaaccctgttacatctacagactggtgtgt
gacttcaccctggagaagaagatctacgatcgtcaggtgtccaagcagggcatgtcagac
cgtgtggtagatgacctgaaccccgtcctcaccttcacccgtaaggaggtggagtctctg
ctgcactacgtggaggaggagcctgatcctagccaatcactgctgcctaaagatgacatg
gagtcagtaattaaacaggcctgtctgtgttatcctcacctcatcaccaagccccctttc
cagcacgagtctttgctgatggaccgcaaggacctgaaactcaccaaagcagagaagaaa
gccgctaagaagagttatgaggatgagaagagggcatctgtaccctaccagcgcccgtcc
tacgcccactattaccctgccaacgagcagagcctctctaacatcaggaactggaggccg
acgccgcggatggacgagaagcccatcgccagcgtgagacccgtccagtccacgcccatt
cccatgatgcctcgccaggctgttgtgggtggccacgcctccggccctgccttccctgta
aactacctgcagaaggccggtgtcctcgttcagcgtgtcattactaccactgatatcgtg
attcccggcactaacagctcgacagacgtgcaggcgaggatcagtgctggagagagcatc
cacgtcatcaaaggttctaaaggtacatacatcaggactaatgatggacggatctttgcc
attcgttctggaaaacccagagccagtgatggagcttctgcagcaactagagaagtgggc
ggttctctcctgcgctcggtcagtaacggccgcgtgtctcctccggagctgaagcgcttt
tctccggatggcatgcgccacgtgtctccgtcctccagccctaacctgctgcaccagatc
catcattacacacccggccctaccaacgaactcgcgctccccgacctcacgccccgcccc
acccagcacggcctctcctccgagcctcagcgtagtgacgtcatcggatctggctccgcc
ctcgacatccagagtctgaagaggaaactcctttcagactctcgaggttccaaaaggtcc
accagcacaacagccgctgctaatttcccagcgtttcccgtgagcggcggctacaacatg
gggtccatgggatttcccccggcccttctgggggctttgggtcacatgacaccacctctg
gttggcggcacaaatcgaggtcaatttcggaacgatttgcaaagcatgttacccactaat
gctttaagctcctcccacggttcctcttcatccaccgccatcgcttcgtcatcctctgcg
cctccgtcatcctcctcctcctccgctatcccaccgttcctctttaattccagcatggcg
aacatgctgtctgggttttccatgcccttcacttcgcctcttctacaggactctccaaga
atgttctccaattctctgtcctcgtcctcatccggctccacccctgccgctccctccttc
ttgtcaccctctagcctgctgggggcggcgctgagtcgacccgacacgcgccacacgctc
gccgagaacggtgggagtagctctgacgacgatgtcatcgaggtgatggggcagtga
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