Tachysurus fulvidraco (yellow catfish): 113637157
Help
Entry
113637157 CDS
T08119
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113637157 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113637157 (dhx8)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113637157 (dhx8)
Spliceosome [BR:
tfd03041
]
Complex C
Other components
Step II factors
113637157 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
Flavi_DEAD
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113637157
NCBI-ProteinID:
XP_026993450
LinkDB
All DBs
Position
8:complement(16295807..16306379)
Genome browser
AA seq
1200 aa
AA seq
DB search
MAELGEDELKQLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKNPTFESFKSVLLKN
GAEFTDSLVSNLLRLIQTMRPPAKASTSKAGSEAAVKTKNEKERLKELFPALCRADNPNT
RNMLDEDDVKVAADAMKELEMFMPSVKATDTKSSKQRSEASSSKKSRRSRSRSRSRDRDR
KRRHRSRSRSRSRSHSPDRERRKRRTRWHSRSRSKSPVRGDREKGSDRWRDKHVDRPPPE
EPAVGDIYNGKITSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVK
VKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGGDGQEESAMRNPDRPTNLNLGHAPE
VEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDS
IPMGLNKHWVDPLPDTDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIE
QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTARGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPDTVIKYMTDGMLLRECLIDPDLGQYA
IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDNEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEG
DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRGQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcggtgaagatgagcttaaacagctcgaatatttatctttagtgtctaaa
gtttgtaccgagctcgacaaccacttgggaatcagcgacaaggaccttgctgagtttgtc
atcagtctggcagaaaagaacccaacgtttgagagttttaagtcagtgctgctcaaaaat
ggagccgagtttacagactcacttgttagcaatttactccggctcatacaaacgatgcgg
ccacccgctaaagcatccaccagtaaagccgggagtgaggctgctgtcaagacaaagaat
gaaaaagaacggttaaaggagctgtttcctgccttgtgccgagctgataatcccaacacc
aggaacatgctggacgaggacgatgtaaaggttgcagctgatgcaatgaaagagctggag
atgttcatgcccagtgtcaaagccacagacactaagagcagcaagcagagatctgaagcc
agcagcagcaagaagagtcgaaggagtaggagccgtagtcgaagtcgggaccgagacagg
aagagacgccaccggtctcggtctcgctcgcgctccaggtctcattctcctgacagggag
aggaggaagcgcaggactcgctggcattcacgcagcaggtccaagagtccagttcgaggg
gaccgagagaaaggctccgaccgctggagggacaaacatgtggaccgaccgcctccagag
gagcctgctgtgggtgacatctacaacggcaaaatcaccagcatcatgcagtttggctgc
tttgtacaacttgaagggttgaggaaacgttgggagggcttggttcatatctctgagctt
cgaagagaaggcagagtggcaaatgtggcagatgtggtcagtaaaggtcagcgggtgaag
gtcaaggtgttgtccttcacaggctctaagaccagtctgagcatgaaggatgtcgaccag
gaaacaggcgaagacttaaatcccaacagacgcaggaatgtcggtggtgatggtcaggag
gagtcggctatgaggaatcccgacagacccaccaacctcaacctgggtcacgctcctgag
gtggaggatgacacactcgaacgcaagagactcacaaagatctccgatcctgagaagtgg
gagatcaaacaaatgattgctgccaatgtgctgtccaaagaggaattcccagacttcgat
gaggagacagggatcctgcctaaagttgatgatgaagaggacgaggacctggagatcgag
ctggtggaagaggagccgcctttcctgagaggacacaccaaacagagcatggatatgagc
cctgtgaaaatagtgaagaaccctgatggctcgctgtctcaggcagccatgatgcagagc
gctctggctaaagaacggcgggaagtgaagcaggctcagcgtgaggctgagatggactcc
attcctatgggcctcaacaagcactgggtggaccctctacctgacactgacggaaggcag
attgcagctaacatgcggggcatcggcatgatgcccaatgacatcccagagtggaagaag
cacgcttttggtgggaacaaagcctcgtacggaaaaaagacgcagctgtccatcatcgag
cagcgagagagtctgcccatctacaaacttaaagagcagctcattcaggctgttcacgac
aaccagatcctgattgtgattggagagactggctcagggaagaccacacagatcactcag
tacctggccgaggctggatacacagcacgtgggaagattggctgcactcagcccagaaga
gtggctgccatgtctgtggctaagagagtgtcagaagaatatggttgttgtttgggacag
gaggtgggctacactatccgttttgaagactgcacgagtccagacacagtcatcaagtac
atgacagatggtatgctgctgagagagtgcctgattgaccctgatctgggccagtatgca
atcatcatgctggacgaggctcacgagaggaccatccacaccgacgtgctcttcggtctg
ctcaagaagaccgtacagaagcgtacagacatgaagctgatcgtgacatctgctacactg
gatgctgtgaagttctcccagtatttctacgaggccccgattttcaccatcccaggtcgt
acttatccagtagaggtgctgtacactaaagagcctgagactgattacctggatgccagt
ctgatcacggtcatgcagatccacctcactgagccaccaggtgatattctggtcttcttg
actggtcaagaggaaatcgacacagcctgtgagatcctgtatgagcgaatgaaatcacta
ggccctgacgtgccagagctgatcatcctacctgtgtactcagcgctccccagtgagatg
cagaccaggatctttgacccagctccacctggcagcagaaaggtggtcatcgcaacaaac
attgcggagacttccctgaccattgatggaatttactatgtagtggatccaggttttgtc
aagcagaaggtgtacaattcaaaaaccggcattgatcagcttgtagtgacccccatctct
caggcccaggctaagcagcgcgcaggtcgagcaggaaggacagggcctggcaagtgctac
agactgtacacagaacgtgcatacagagatgagatgctcaccaccaatgtgcctgagata
cagagaactaacttggccagcactgtgctctcccttaaggctatgggcattaatgacctg
ttatcatttgacttcatggatgctcctcctatggagacattgatcacagcaatggagcaa
ctttacacattaggggccttggacaacgagggactccttactcgtctcggccgcaggatg
gccgagtttcctctagagcccatgttgtgtaagatgctcattatgtctgtccatctgggc
tgtagtgaagagatgctaaccatagtgtccatgctctccgtgcagaatgtcttctacagg
ccaaaggacaaacaggctctagctgaccaaaagaaggctaagttccaccagcctgaggga
gaccacctcactttactggctgtgtacaattcttggaagaacaacaagttctccaatcct
tggtgctacgagaacttcatccaggctcgctcattacgccgtggacaggatatccgcaag
cagatgctgggcatcatggaccgacacaagttggatgtggtatcttgcggtaaggccaca
gtacgtgtgcagaaggcaatctgtagcggtttcttccgtaacgccgctaagaaagaccct
caggaaggctacaggacactcatagaccagcaggtggtttatattcacccatcgagtgcc
ctcttcaaccgacaacctgagtgggtggtataccatgaactggtgctgaccaccaaagag
tacatgcgagaggtgaccacaattgacccacgttggctggtggagttcgctccggccttc
ttcaaagtctctgaccctactcgcctcagcaagcagaagaaacagcagcgtcttgagcct
ctctacaaccgttatgaggagcccaatgcctggagaatttccagagctttccgcaggcgc
taa
DBGET
integrated database retrieval system
