Tachysurus fulvidraco (yellow catfish): 113637160
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Entry
113637160 CDS
T08119
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03420
Nucleotide excision repair
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113637160 (ercc4)
03460 Fanconi anemia pathway
113637160 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113637160 (ercc4)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113637160 (ercc4)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113637160 (ercc4)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
113637160 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
113637160
NCBI-ProteinID:
XP_026993455
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Position
8:complement(15453517..15462719)
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AA seq
895 aa
AA seq
DB search
MEGLLLEYETEMFLSLFSTDGLLIAAEGLGIDRILLHFMRIYSEEGSLVLLLNTTAPEQE
FFTEQLRAEGVNHLPQIINSDTQNTERYHVYTQGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATAFSTGFCQVERVMRNLFVKKL
FLWPRFQASVNTVLDRHRPDVVELHVNLTPAMRAIQSSILDIMNACLKELKRYNPSLEAE
DLSLENTLGSAFEKTIRHYLDPLWHQLGTKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFVNARSRVYRVPESNKKLKVGDVEEKPNASAPLKR
ELVLEKNPKWEALSEVLQEIEKEMSNSEHEPGRVLICASDDRTCAQLKEYIQKGAESLLL
RLYSRTIGKDDRLLVSEKTKQGNSWPRKGVRKEPKGKKPQAKNTKLGPKKQRGSLTLTQM
VEQRKEAELEQMGNSADEREQEEKQDVNDDVLFNLTSDSYYGVLQEPMTVIHPLKGCSDP
YSLTRVLKEVEPMFVVLYDAELSFVRQLEVYKAARPGKPLRVYFLIYGGSTEEQRYLTAL
RKEKQAFEQLIRDKASMVVPEEREGRGDTNLDLDRSQEPAHAAADTRKAGGQEVVKEPSR
VIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPEICVERKSVSDLIGSLQSGRLYT
QCLAMNRFYRRPVLLIEFDPAKPFSLIGRNELRQEISANDITSKLTLLTLHFPRLRLLWC
PSPHATGQLFQELKHARPEPDALTAQAITAESETVEDSVDLYNPGPYDFLLRMPGVNVKN
VRGLIKHAASLAELLTLSQEKLSEILGSVSNARQLHEFLHNTMDVASVQKNRQMK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagggactgctgcttgagtacgaaacagaaatgtttctgagcctcttcagtacagat
ggcttactgatcgcggctgaaggacttggtatcgaccgcattttgttacactttatgagg
atttattcagaggaaggaagtctggtgctgctgctcaacacaacggcacctgaacaggag
tttttcacagagcagctgagagctgaaggagtgaatcatcttccccagattataaacagt
gatacacagaacactgaacgttaccatgtgtacacacaggggggagtgttgtttgtgacc
agccgcatcctggtagtggatttcctcacagacagaattcctgctcacctcatctcagga
atcctcgtctaccgggcccataagatcattgagtcgtgtcaagaggcctttatcttgaga
ctgtacagacagaagaacaagactggcttcatcaaagctttcacagacaaggccacggct
ttctctactggcttctgtcaagttgagcgagttatgaggaatctctttgtgaagaagctc
tttctttggccaaggttccaagcctcagtgaacactgtactggacagacacagacctgat
gtggtggagctgcacgtgaatttgactccagccatgagagccatccagagctccattctg
gacatcatgaacgcctgtttgaaggagctcaagcgttacaacccgagtctggaggcagaa
gacctctcgctggagaatacactgggcagtgcctttgagaaaaccattcgccattaccta
gatcccttgtggcatcagctgggcactaagaccaaatctttagtgcaggacctgaagatc
ttacgaactctgttgctgtacctcacacagtacgactgtgttaccttcctcaacctgctg
gagtccctgcgttctagccagaaaaactttggcagcaattcaggatggctgtttctagac
tccagcacatcgatgtttgtgaatgctcgtagtcgtgtgtatcgtgttcctgagtcaaac
aagaaactcaaagttggtgatgtggaagaaaaaccaaatgcctctgcacctttaaaaaga
gagcttgtgcttgaaaagaatccaaaatgggaggctttgtctgaggtgctgcaggagatt
gaaaaggaaatgagcaactctgagcacgaaccaggccgggtgttgatatgcgcgagtgac
gataggacctgtgctcagctgaaggagtacatccagaaaggtgctgagtcgctgctcctc
cgcctttactcacgtactatcggtaaagatgatcgtctactggtgtctgagaagaccaaa
caaggtaacagctggcccaggaaaggtgtaagaaaggagcccaagggcaagaagccccaa
gccaaaaataccaaactcggcccaaagaaacagcgaggctcactgacactcacccaaatg
gtagagcagcggaaagaagccgagctggaacagatgggcaacagtgcagatgagcgagaa
caggaggaaaagcaggatgtgaacgatgatgttctttttaatcttacttcagactcctac
tatggtgttcttcaagaacccatgacggtcattcatccgctcaaaggatgctcggatcca
tacagtcttacgagggtgttaaaagaggttgagcccatgtttgtggtgctgtatgatgct
gagctcagctttgtgcgccagctggaggtttacaaagccgccaggccaggcaaacctctc
cgggtgtattttcttatttacggtggttccacagaggagcagaggtatctcactgccctg
cgtaaagagaaacaagcatttgaacagctgataagagacaaggcaagcatggttgttcca
gaagagagagaaggcagaggagacacaaacctggacctggatcgtagtcaggaacctgct
cacgctgctgcagacactcgcaaagcaggtggacaagaggtagtcaaagagccctcccga
gtcatcgtagacatgcgggagtttcgcagcgagcttccttcgcttctgcaccggcgtggg
ctcgacattgagcctgtcaccctggaggtgggagactacatcctgactcctgaaatctgc
gtggaacgcaagagtgtgagtgacctgataggctcgctgcagagcggccgtttatacact
cagtgcctcgccatgaaccgcttctaccgccggcccgtgctgctcattgaattcgacccg
gccaagccgttctcgctaataggccgtaacgagctgcgacaggagatctcagccaacgac
atcacctccaaactgaccctgctgactctccatttcccccggctgaggctgctctggtgc
ccatcgccccatgccaccggacagctctttcaggaactcaaacatgctcggcctgagcct
gatgccctcactgcccaagccattacagcagagtcagagacggtggaagattcagtagac
ctgtacaacccaggaccttatgacttcctgctccgtatgcctggagtgaacgttaaaaat
gtacggggactcattaaacatgctgccagcctggctgagctcctcactctgagccaggaa
aagctgagtgagattttgggcagtgtgagtaatgccaggcagctccatgaattcttacac
aataccatggatgtagcttcagttcagaagaacagacaaatgaagtaa
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