Tachysurus fulvidraco (yellow catfish): 113637163
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Entry
113637163 CDS
T08119
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03430
Mismatch repair
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113637163 (pms2)
03460 Fanconi anemia pathway
113637163 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113637163 (pms2)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113637163 (pms2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113637163
NCBI-ProteinID:
XP_026993460
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Position
8:14957099..14965646
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AA seq
846 aa
AA seq
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MTDPSSDPARAIRAIDKRSVHQICSGQVVLTLATAVKELVENSIDAGATQVDIRLKENGT
ELVEVSDNGRGVEEENFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHECSHVGTRLVFDHNGRLVQRAPHPRQQGTTVSLQQLFSTLPVRHKEFQRNIKKEFSK
MVHVLQSYCIISTGVRITCTNQLGQGKRNTLVCTSGSQSMRDNIGALFGPKQLQSLLPFQ
QISPNESVKEDYGLTGEQLPKDLFKISGYVSQADHGVGRSATDRQFFYINKRPCDPSKVS
KLINEVYHMFNRHQYPFVALNISVASECVDVNVTPDKRQIFLQEEKLLLATMKSSLIAMY
ETGVNKISLNHTPLITGSFSRCGDSAKSSEGLQKASLTGLTSEDDSKTLTQTPKTSFNLA
GLKAAFSKHQDTSVTTKTSNSKTLCNGPTQKKMQSFFHCSEMTNYSRPSDCASDLSKHEH
KSDIEADSGLSEQSSFTQTPDTLCGGSSEFDSPDSVLEEHSVKMQSCVSVSVDEVHNGLE
ASKQETMSVINTERISSPKAKKCRWDDDLSEQLQLPSSSASGASCGLFDKPVSVQRKTVP
LPFSMTELVKRMERLKTQKQKQNDKELKYRRFRAKINPGENQSAEDELKKEISKDMFKEM
EIIGQFNLGFIITKLKSDLFIIDQHATDEKYNFEMLQQHTVLNGQRLIIPQNLHLPAVSE
SILIENLEIFKKNGFDFLIDENAPVMERVKLISVPTSKNWTFGPGDIEELIFMLSDSPGV
MCRPSRVRQMFASRACRKSVMIGTALNSSEMKKLVVHMGEIEQPWNCPHGRPTIRHLLNL
DVISQD
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccctagctcggatcctgccagagccatcagggccattgataaacgctctgtg
catcagatctgctctgggcaggtggtgttgactttggccacagctgtgaaagagctggta
gagaacagcatcgatgcgggtgccacacaagttgacatcaggctcaaagagaacgggaca
gaattggtggaagtctctgacaatggacgaggtgtagaggaggaaaatttcgaaggactg
actttaaagcaccatacatcgaaactgagagatttctctgacttaattcatgttgaaact
tttggcttccgtggtgaagccctgagctcactatgtgccctcagtgacctcagcgtggtt
acctgtcatgaatgcagccatgttggaactcggctggtctttgaccacaacggccgtctt
gtccagcgagctcctcatccccgacagcaggggacgacggtcagccttcagcagctcttc
tccaccctgccagttcgccacaaagagtttcagcgcaatatcaaaaaggagttttctaag
atggtccatgtcctccagtcatactgcatcatctctactggtgtgcgaatcacatgcact
aatcagctcgggcaaggcaagcgtaacactttagtgtgcaccagcgggagccagagcatg
agagacaacattggagcactgtttggcccaaaacagctccagagtctacttccttttcag
caaatatctcccaatgagagtgttaaagaggattatggattaactggggaacaacttcct
aaagaccttttcaagatctctggttatgtatcacaagctgatcatggtgtgggacgaagt
gcaacagaccggcagttcttctatatcaacaaaaggccctgtgatccatctaaggtttct
aagcttataaacgaggtgtatcacatgttcaaccgtcatcagtacccatttgttgctcta
aacatttctgttgcttcagaatgtgttgacgtcaacgttacaccagataagcgtcagata
tttctgcaggaggagaagctgttgcttgctaccatgaagagctctctcattgccatgtat
gagaccggagtcaataaaatcagtctcaatcacacaccactaatcacaggcagtttttcc
agatgtggtgattctgccaaaagttcagaaggtcttcagaaagcttcactgactggattg
acttcagaagatgattcaaagactttgacacagactccaaagacatcatttaacttagct
ggactaaaggcagcattttcaaaacatcaggatactagtgtcacgacaaagacgtctaac
agtaaaactctgtgtaacggtccaacgcaaaaaaagatgcagtcttttttccattgctca
gaaatgactaactacagcagaccatcagattgtgcttcagacctaagcaaacatgaacac
aagtcagacatcgaggctgattcaggtctgtcagagcaaagctctttcacacaaacccca
gacacactatgtggaggcagctctgaatttgactctccagactctgttttagaagaacat
agcgtaaaaatgcagtcttgtgtcagtgtgtctgtggatgaggtgcataacggtttagaa
gcgtcgaagcaagagacaatgtctgttattaatactgaaaggatttctagtcccaaggca
aagaaatgtaggtgggatgatgacttatctgaacagctccaactgccatcctccagtgcg
agcggtgcttcctgtggactgtttgacaaaccggtcagtgtgcagagaaaaacagtgccc
ttgccattttcaatgaccgagctggttaaaaggatggagagattaaagacccagaagcaa
aagcagaatgataaggagctaaaatatagacgcttcagggcaaaaattaaccctggtgaa
aaccagagtgctgaggatgaattgaagaaagaaataagcaaggacatgtttaaggagatg
gagatcattggtcagttcaacctgggttttatcattaccaagttaaagtcagatcttttc
attattgaccagcatgccacagacgaaaagtacaactttgagatgctacagcaacatact
gttttaaacggacagagacttataatcccacagaatctccaccttcctgctgtaagtgaa
tcaattctgattgaaaatctggaaatcttcaagaaaaatggctttgacttcctcattgat
gagaatgcaccagtcatggaaagagtgaagctaatatctgtacccacaagcaagaactgg
acctttggccctggtgacattgaggagctcatcttcatgcttagtgacagtcctggggtc
atgtgccgaccttctcgagtcaggcagatgtttgcgtcgagagcatgccgcaaatcagta
atgattggtactgcactgaattccagtgaaatgaagaagcttgtggtccacatgggggaa
attgagcagccttggaactgccctcatggccggccgaccatcaggcacctgctgaatctt
gatgttatttctcaggactga
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