Tachysurus fulvidraco (yellow catfish): 113637183
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Entry
113637183 CDS
T08119
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113637183 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113637183 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113637183 (mgrn1a)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113637183 (mgrn1a)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113637183 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113637183
NCBI-ProteinID:
XP_026993506
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All DBs
Position
8:complement(15395312..15405829)
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AA seq
560 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGQKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKAETESTAEEAGNAGVLYGV
EFYFDTDARVAITLYCQAFEEFSNGVAVYTSKTPAMASETVCYKRGINQQFSLPSFKIDF
TRWKPEELNFDLDRGVFPLVVHAVVDDGDDVVGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKSVEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPAGVISSVPFSPVLSQSSDNTENSNSENIP
PGYEPVSLLEALNGVQPASPALPSAPLYEEVQYSEEIGDPLTLSMKQQSTVELSADPLAL
KPKLSKSPDGSTRSPTSPIQEEEDDEEHLSDLSDAQPRPVRPYSPAPTEATVDGIESDPG
SPNTGSEGMSVGVSVSEILQDCHSVRSSLSRTESDPSADLALPGSSGSIESLKSQSTSSS
IQPLLCLPSSLCIEDELLSP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatacttagtcgaagaattgctggagttgaagacattgatattcaggctaat
tccgcttacagatatcctcccaaatccggaaattatttcaccagtcacttttttatgggt
gggcagaaatttgacaccccccatccagagggatatctgtttggagaaaacatggatttg
aattttttaggcaaccgacctgttcagtttccctatgtgacccctgcacctcacgagccc
gtcaagacactaaggagtctagtgaacatcaggaaagactccttacggcttgttaggtac
aaagctgaaactgaaagcactgcagaggaagctggaaatgcaggagttttgtatggcgtg
gagttttactttgacactgatgccagggtggccatcacactatactgccaggcgtttgag
gagttttctaatggggttgcagtctatacttcaaaaaccccagccatggcatctgagaca
gtctgctataagagagggataaaccaacagttttctctgccgtctttcaagattgatttc
actagatggaaaccggaggagctgaactttgacctggacagaggtgttttccctctggtg
gttcacgcagttgtggatgatggagatgatgttgttggacacgctcatgtgcttttagca
gcattcgaacggcatgttgatggcagtttttcagtgaagcctttgaagcagaagcaaatt
gttgatcgcgtcagctacctactgcaagagatttatggcatcgagaataagaacaatcaa
gagacaaagtctgtagaagacgagaacagtgacaacagcagtgagtgtgtggtgtgcctg
tcagacctgcgcgacacactcattctcccctgcaggcacctttgtctctgcaatgcgtgt
gctgacacactacgttaccaagccaacaactgccctatctgccgactgccctttagagca
ctactacaaatccgtgcagtgaggaagaaacctgcaggagtgatctcttctgtccccttt
agtccggtgctgtctcagagctcagacaacacagagaattcgaactctgagaacatccct
cccggttatgagcctgtgtccctgctcgaggccctaaacggcgtgcagcctgcgtctcct
gctcttccctcagctcctctgtatgaagaagttcagtactcagaagaaataggtgaccca
ctgaccctgagcatgaagcagcagagcaccgtggagctcagtgcagatccgctggctctg
aagcccaaactcagcaagtcaccagatgggtctacacgctcccccacatctccaatccag
gaggaggaggatgatgaggagcatctgtctgatctgtctgatgctcagcctcgacctgta
cggccctacagtccagcacctactgaggcgacagtagatgggatagaatccgatccagga
tcccctaacacaggttcagagggcatgtctgtgggggtgtctgtaagtgagatcctgcag
gactgccacagtgtgcgcagcagcctgagccgtactgagagtgatccctctgccgacctg
gcactgcctgggtcatcagggtccattgagagtctgaagagtcagagcaccagcagctcc
atccagcctttgctctgcctccccagcagcctgtgcatcgaggacgagctcctcagcccc
tag
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