Tachysurus fulvidraco (yellow catfish): 113637294
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Entry
113637294 CDS
T08119
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1 isoform X1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113637294 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113637294 (vcpip1)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113637294 (vcpip1)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C64
113637294 (vcpip1)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
113637294 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113637294
NCBI-ProteinID:
XP_026993689
LinkDB
All DBs
Position
22:complement(11549202..11557468)
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AA seq
1109 aa
AA seq
DB search
MSSGQSTKKRDKRILSGVCPDFKCQARLFFPACSSVSIECTECGQRHEHKDLLNVEEVTD
PDVVLHNLLRNALLDVSGVPKKSTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EINQGELFDCSLLGGRAFLIEQEHICTVGYGKDRSGSLIYLHDTLEEIKKANNNQECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLSFKKNLDRYKALFQDFIDTAEWQDII
SECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGSLNKPICIAWSSSARNHYLPLVGIKGLPLPKLPAALIPKAWGVPQELICRYVN
LEPCGGCVIGGDRSLQDKYLLRLVSAMEDVFIEKHGIHPALVADVHQYVYRRTGVIGIQP
EEVTEAAKKLVLENRLHRCLICSALSELHVPTEWLVPGGKLYNLAKSTHGTLRGDKNYTF
PLNNLVCSYCPERDALVPDYKLSSLSTCTWCHRNTVRHVRGDGSIVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYELDLALNSNVYDVAMRLV
TKHFPGEFGSEILVQKVVNTVLHHTAKKNPEEYNPVAIEGAHMQGQGQGGGQIVELDTNP
PQKIILTGQKGRTLHKEELVMSQAERNLQHKISEQAALSQRRRSQRQQIQDQTAKPRSAS
PAPSSSAPPTPTKGMTPSGQKKIRVTTSDGRQATLQLQANNTYAELQEAITQAFNLQPHQ
QGIRHGFPPRELPPPPPEHQDLPVALQHGDRITVEVLKERVPDPEINTHTPMEPWLSRTS
SREIQDSVDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHCT
LPHLTGKTFVFNAAEERLELCVDAAGHFPVGPNVEEIIQEALLCSEAPSRNREGSPAHGL
KLGSGGVVRKKEQTVTAFQGKGHSLGSTSHEHHPIRREHSNGVDLSGSVQEEGLARSREE
LVRVAPGMLTLREGCRELELEPTAIEAQRRRLQEMVSNIQASMDKHLRQQTTPSTATKQN
EKEDLDEQDERKSQGAESPSISEPMDQSL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgggacaaagtacgaagaaaagggacaagcggattttatcaggtgtttgtccg
gattttaagtgtcaggcgagattgttttttccagcttgtagctcagttagcatcgagtgc
acggaatgtggacaacgtcacgaacacaaggatctgttaaacgtggaagaagtaactgac
cctgatgtcgtgcttcataatttactgagaaacgctttgctcgacgtttcaggagtcccg
aagaaaagcacggagttggtgaaagtcatgggtttgtctaattatcactgcaagctgctt
tcaccgattctcacccgttacgggatggacaaacagacgggaaaagcgaaactgctccgg
gagataaaccaaggtgagctgtttgactgctcgctgctgggtggcagagctttccttata
gaacaggagcacatctgtacagtcggctatggcaaggacagatctggcagcctcatctac
ctccatgatacacttgaggagatcaagaaagccaacaacaaccaagaatgtcttattcct
gtacatgtggacggagacggtcattgcctggtgcatgcagtgtccagggctttggtgggt
cgtgagcttttttggcacgccttaagagagaacctcaagctcagcttcaagaaaaatctg
gatcgctataaagctctgtttcaagactttattgacactgcagaatggcaggacatcatt
agtgagtgcgaccctttgtttgtgccaccagaaggtgtccctctcggattgaggaacata
catatttttggactcgccaatgtcctacatcgtcccataatcctgctggactctctgagt
ggaatgaggagctcaggcgactactcggcaacgtttctgccaggcctggtgcctgaggag
caatgcagaggaaaggatggctctctgaacaagcctatatgcatcgcttggagcagctca
gccaggaaccattatcttcctctagtgggcattaaaggattgccactaccaaagctgcct
gctgcacttattccaaaggcttggggagttccgcaggagcttatctgtaggtatgttaat
ctggaaccctgtggaggctgtgttatcggaggagatcgaagcctgcaggataaatacctc
ctccgtttagttagtgctatggaggacgtttttattgagaaacatggcatccatcctgca
ctggtggctgacgttcatcagtatgtttaccgccgaacaggggtgattggcatccagcct
gaagaggtgacagaggcagcaaaaaaattggtgctggagaatcgtctgcaccgctgtctg
atatgcagtgcactgtctgaactccatgttccaactgagtggttagtaccaggtggaaaa
ctttacaaccttgcaaagtctactcatggcactctccggggagacaagaactacaccttc
ccattgaataacttggtatgctcctactgccctgagagggatgcactggttcctgactac
aaactcagttcactatcaacgtgcacctggtgccacagaaacactgtgcggcatgtccgt
ggtgatggatctatagtgtacctagatggggaccgtaccaacacacgctcacagggtggt
aagtgtggttgtggatttaaacattactgggaaggaaaggaatatgacaacttgccagag
gcattccccattacccttgagtggggtggccgtgtagtccgtgagacagtctattggttc
cagtatgaattagacctagcattgaatagcaatgtctacgacgttgcaatgcgccttgtc
acaaagcacttcccaggagagtttggcagtgagattctagtgcagaaggtggtgaacaca
gttttgcaccacacagcaaagaagaacccagaggagtacaatccagtggctatagagggt
gctcacatgcagggccaggggcaagggggtggacagatagtggagttggatacaaaccct
ccccaaaagattatattgacaggccagaagggccgcaccttacataaagaggaactggtg
atgagccaagcagagcggaatctgcagcataagattagcgagcaggcagctctgtcccaa
cggcgacggtcacagcgtcagcagatacaagaccagactgcaaagcctcgctccgcctct
cctgccccctcctcctcagctccacccacacctactaaaggtatgacccctagtgggcag
aagaagatcagagtgacaaccagtgatgggcgacaggcgacactgcagctacaagccaat
aatacctatgcagaactgcaggaagccatcacccaagccttcaacctacagccccaccaa
cagggtatccgacatggctttcctccccgggaacttcccccaccaccccctgagcatcag
gacttgcccgtggccctgcaacacggagatcgcatcactgttgaagtgcttaaagagcgt
gtcccagacccagaaataaatacccataccccgatggaaccttggctcagcagaaccagc
agccgagagatacaagacagcgttgacctggagatgtcatcactctgtctccttgcaaca
cttatgggtgaggatgtgtggtcatatgctaagaagttacctcatttgtttcagcaagga
ggagtcttctataacattgtaaagaaagatatgggtctgttggatgggaagcactgcact
cttccacatttgactggtaagacatttgtgtttaatgcagcagaggaacgtttggaacta
tgtgtggatgctgctggacacttcccagtgggccctaatgtggaggaaattattcaagaa
gctctgttgtgttctgaggctccctctcgcaatcgtgagggaagccctgctcatggcctg
aaattgggcagtggaggggtggtgcgcaagaaggagcagacagttactgctttccagggc
aaaggtcattcactgggctccacctcacatgagcaccatccaatcaggcgagaacacagc
aatggagtggacctgagtggcagtgtacaggaggaggggctagcacggtcaagggaagag
ctggtgcgtgttgctccgggcatgctcaccctgcgggaagggtgtagagaattagaatta
gagcccacagcgatcgaggctcaacggcgccgtctgcaggagatggtctcaaatatacag
gcgtctatggacaaacacttacggcaacagacaacacctagcaccgctactaagcagaat
gaaaaggaagatctagatgagcaagacgagagaaagagccagggagcagagtctccaagc
atctctgagcccatggaccagtccttatga
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