KEGG   Tachysurus fulvidraco (yellow catfish): 113637306
Entry
113637306         CDS       T08119                                 
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03271  Virion - Rotavirus
tfd04145  Phagocytosis
tfd04510  Focal adhesion
tfd04512  ECM-receptor interaction
tfd04514  Cell adhesion molecule (CAM) interaction
tfd04517  IgSF CAM signaling
tfd04518  Integrin signaling
tfd04530  Tight junction
tfd04810  Regulation of actin cytoskeleton
tfd04820  Cytoskeleton in muscle cells
tfd05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    113637306
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113637306
   04514 Cell adhesion molecule (CAM) interaction
    113637306
   04517 IgSF CAM signaling
    113637306
   04518 Integrin signaling
    113637306
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    113637306
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113637306
   04530 Tight junction
    113637306
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113637306
   04810 Regulation of actin cytoskeleton
    113637306
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113637306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfd04131]
    113637306
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113637306
   04515 Cell adhesion molecules [BR:tfd04515]
    113637306
   04090 CD molecules [BR:tfd04090]
    113637306
Membrane trafficking [BR:tfd04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113637306
Exosome [BR:tfd04147]
 Exosomal proteins
  Proteins found in most exosomes
   113637306
Cell adhesion molecules [BR:tfd04515]
 Integrins
  Integrin beta subunits
   113637306
CD molecules [BR:tfd04090]
 Proteins
  113637306
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin
Other DBs
NCBI-GeneID: 113637306
NCBI-ProteinID: XP_026993710
LinkDB
Position
22:11800103..11823437
AA seq 798 aa
MKVNVVLTAVLLGFSSFCSAQLDGNACTKALAQSCGECIQVGEKCGWCTDEAFLKQGEPK
STRCDEIDALLKKGCDKDKVENPRGEVIVNENKTVTNRKKDVAEKLKPDQIIQIQPQKLT
LNLRAGEPQKFSLRFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTALMTKMRKVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTTDQNCTSPFSYKNVLSLTENGQQFNNLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
SDEVTFDIAITTKGCPSPDKQEVIKIKPLGFNEEVVIALNFICECECSKEGILKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDGTAEDLDANCRMDNGTDICSNNGACVCGTCECR
TRENPEERYEGKFCECDNFNCDRSNNKLCGGHGQCVCRRCVCDTNYTGSACDCPLDKQPC
VASNGQLCNGRGTCSCGVCKCTDPKFQGKTCEICPTCPGVCTEHKSCVQCRAFNTGELKD
NCEEKCNYFKLNKVKEKDDLPQPNSQPFLTHCKERDANDCWFFFTYSSKNDSAEVYVVER
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEGK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaaagtgaatgtggtgttgacagctgttctgctggggttctcctccttctgttcagct
caactagatggtaatgcgtgcacaaaagccttagctcaatcctgtggtgaatgcattcag
gttggagaaaagtgtgggtggtgcactgatgaagcctttctaaagcaaggagaacccaaa
tcaacacgctgtgatgaaattgatgctctgcttaagaagggctgtgataaggacaaagtg
gaaaatcctcgaggtgaagtgattgtcaatgaaaacaaaactgtcacaaaccgtaaaaaa
gatgtggctgagaaactgaaaccagaccagatcattcagattcaacctcagaagctcaca
ctaaacctaagagcaggtgagcctcaaaaattttccctgaggtttaaaagggcagaggat
taccccattgacctgtactatctgatggacttgagttactccatgaaagatgatttggag
aacgtaaaaaatttgggaactgccctgatgactaagatgcggaaagtcacgtctgacttc
aggattggttttggttcatttgtggaaaagactgtgatgccatatatcagtacaactcct
gccaagctgctgaatccatgcactactgatcagaactgcacaagccccttcagctataaa
aatgtactgagtctgactgagaatggccagcagtttaacaaccttgtcagtcggcaacag
atttctggaaacctcgactcacctgagggaggctttgacgccatcatgcaagttgcagtc
tgtggggaacagattggttggagaaatgtcactcggctactagtcttttctactgatgct
ggttttcacttcgccggagacggtaaactgggtggcatcgtgcttcccaatgatgggaaa
tgccacctgaaggataatatgtacacaatgagccattactatgactacccttcaatcgca
caccttgtacagaaactgagtgacaacaacattcagacaatctttgctgtaactgaagag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtctgctgttggaacattg
tccgcaaactccagtaacgtgatcaaacttatcattgatgcctacaattctctttcttct
gaggtgatcctggagaacagcaagttacctgagggagtgtccatctcttatgtgtcccac
tgcaaaaatggagttagtgaaacaggagacaatggaagaaagtgctcgaacatctctatc
agcgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacccgataaa
caagaggtaataaagatcaagcctctaggattcaacgaggaggttgtgatcgctctaaac
ttcatctgtgagtgtgaatgttccaaagaagggatcctcaaaagtccagactgtcacttt
ggcaatggaactctcgagtgtggagcatgcagatgcaacgaggggcgaattggaagggtt
tgtgaatgtagcaaagatgatggcacggcagaggaccttgatgcaaactgccgcatggac
aatggcacggatatctgtagcaacaacggggcctgtgtctgtggaacatgtgaatgcagg
acgcgagagaacccagaggagcgctatgaagggaagttctgtgaatgtgacaactttaac
tgtgaccgatccaacaacaagctatgcggaggtcatggtcagtgtgtctgcagaaggtgt
gtatgtgatacaaactacacaggcagtgcatgtgactgcccactggacaagcagccctgt
gtggccagtaatgggcagctctgtaatggtcgtggcacctgttcctgtggagtgtgtaaa
tgcaccgacccaaagtttcagggtaaaacctgtgagatttgccccacttgtcctggagtc
tgcacagaacacaaatcttgtgttcagtgccgtgcatttaatactggagagttgaaggat
aactgtgaagagaaatgcaattactttaaactgaacaaggtgaaggaaaaggatgatctt
cctcagccaaacagccagcccttcctcactcactgcaaagagcgtgatgccaatgactgc
tggttcttcttcacttattccagcaagaatgacagtgctgaagtctatgttgtggagagg
ctggaatgccctactggtcctgacattatcccaatcgtagcgggtttggttgctggcatc
gttcttattggtctggccctgcttttcatctggaagctgcttatgattattcatgaccgc
agagagtttgcaaagtttgagaaggagaagatgaatgccaagtgggatgcgggtgagaat
cccatctacaagagtgcagtgactacagtggttaatcccaagtacgagggaaagtga

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