Tachysurus fulvidraco (yellow catfish): 113637306
Help
Entry
113637306 CDS
T08119
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03271
Virion - Rotavirus
tfd04145
Phagocytosis
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
tfd04518
Integrin signaling
tfd04530
Tight junction
tfd04810
Regulation of actin cytoskeleton
tfd04820
Cytoskeleton in muscle cells
tfd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113637306
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113637306
04514 Cell adhesion molecule (CAM) interaction
113637306
04517 IgSF CAM signaling
113637306
04518 Integrin signaling
113637306
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113637306
09144 Cellular community - eukaryotes
04510 Focal adhesion
113637306
04530 Tight junction
113637306
09142 Cell motility
04820 Cytoskeleton in muscle cells
113637306
04810 Regulation of actin cytoskeleton
113637306
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113637306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113637306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113637306
04515 Cell adhesion molecules [BR:
tfd04515
]
113637306
04090 CD molecules [BR:
tfd04090
]
113637306
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113637306
Exosome [BR:
tfd04147
]
Exosomal proteins
Proteins found in most exosomes
113637306
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin beta subunits
113637306
CD molecules [BR:
tfd04090
]
Proteins
113637306
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
113637306
NCBI-ProteinID:
XP_026993710
LinkDB
All DBs
Position
22:11800103..11823437
Genome browser
AA seq
798 aa
AA seq
DB search
MKVNVVLTAVLLGFSSFCSAQLDGNACTKALAQSCGECIQVGEKCGWCTDEAFLKQGEPK
STRCDEIDALLKKGCDKDKVENPRGEVIVNENKTVTNRKKDVAEKLKPDQIIQIQPQKLT
LNLRAGEPQKFSLRFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTALMTKMRKVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTTDQNCTSPFSYKNVLSLTENGQQFNNLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
SDEVTFDIAITTKGCPSPDKQEVIKIKPLGFNEEVVIALNFICECECSKEGILKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDGTAEDLDANCRMDNGTDICSNNGACVCGTCECR
TRENPEERYEGKFCECDNFNCDRSNNKLCGGHGQCVCRRCVCDTNYTGSACDCPLDKQPC
VASNGQLCNGRGTCSCGVCKCTDPKFQGKTCEICPTCPGVCTEHKSCVQCRAFNTGELKD
NCEEKCNYFKLNKVKEKDDLPQPNSQPFLTHCKERDANDCWFFFTYSSKNDSAEVYVVER
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaatgtggtgttgacagctgttctgctggggttctcctccttctgttcagct
caactagatggtaatgcgtgcacaaaagccttagctcaatcctgtggtgaatgcattcag
gttggagaaaagtgtgggtggtgcactgatgaagcctttctaaagcaaggagaacccaaa
tcaacacgctgtgatgaaattgatgctctgcttaagaagggctgtgataaggacaaagtg
gaaaatcctcgaggtgaagtgattgtcaatgaaaacaaaactgtcacaaaccgtaaaaaa
gatgtggctgagaaactgaaaccagaccagatcattcagattcaacctcagaagctcaca
ctaaacctaagagcaggtgagcctcaaaaattttccctgaggtttaaaagggcagaggat
taccccattgacctgtactatctgatggacttgagttactccatgaaagatgatttggag
aacgtaaaaaatttgggaactgccctgatgactaagatgcggaaagtcacgtctgacttc
aggattggttttggttcatttgtggaaaagactgtgatgccatatatcagtacaactcct
gccaagctgctgaatccatgcactactgatcagaactgcacaagccccttcagctataaa
aatgtactgagtctgactgagaatggccagcagtttaacaaccttgtcagtcggcaacag
atttctggaaacctcgactcacctgagggaggctttgacgccatcatgcaagttgcagtc
tgtggggaacagattggttggagaaatgtcactcggctactagtcttttctactgatgct
ggttttcacttcgccggagacggtaaactgggtggcatcgtgcttcccaatgatgggaaa
tgccacctgaaggataatatgtacacaatgagccattactatgactacccttcaatcgca
caccttgtacagaaactgagtgacaacaacattcagacaatctttgctgtaactgaagag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtctgctgttggaacattg
tccgcaaactccagtaacgtgatcaaacttatcattgatgcctacaattctctttcttct
gaggtgatcctggagaacagcaagttacctgagggagtgtccatctcttatgtgtcccac
tgcaaaaatggagttagtgaaacaggagacaatggaagaaagtgctcgaacatctctatc
agcgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacccgataaa
caagaggtaataaagatcaagcctctaggattcaacgaggaggttgtgatcgctctaaac
ttcatctgtgagtgtgaatgttccaaagaagggatcctcaaaagtccagactgtcacttt
ggcaatggaactctcgagtgtggagcatgcagatgcaacgaggggcgaattggaagggtt
tgtgaatgtagcaaagatgatggcacggcagaggaccttgatgcaaactgccgcatggac
aatggcacggatatctgtagcaacaacggggcctgtgtctgtggaacatgtgaatgcagg
acgcgagagaacccagaggagcgctatgaagggaagttctgtgaatgtgacaactttaac
tgtgaccgatccaacaacaagctatgcggaggtcatggtcagtgtgtctgcagaaggtgt
gtatgtgatacaaactacacaggcagtgcatgtgactgcccactggacaagcagccctgt
gtggccagtaatgggcagctctgtaatggtcgtggcacctgttcctgtggagtgtgtaaa
tgcaccgacccaaagtttcagggtaaaacctgtgagatttgccccacttgtcctggagtc
tgcacagaacacaaatcttgtgttcagtgccgtgcatttaatactggagagttgaaggat
aactgtgaagagaaatgcaattactttaaactgaacaaggtgaaggaaaaggatgatctt
cctcagccaaacagccagcccttcctcactcactgcaaagagcgtgatgccaatgactgc
tggttcttcttcacttattccagcaagaatgacagtgctgaagtctatgttgtggagagg
ctggaatgccctactggtcctgacattatcccaatcgtagcgggtttggttgctggcatc
gttcttattggtctggccctgcttttcatctggaagctgcttatgattattcatgaccgc
agagagtttgcaaagtttgagaaggagaagatgaatgccaagtgggatgcgggtgagaat
cccatctacaagagtgcagtgactacagtggttaatcccaagtacgagggaaagtga
DBGET
integrated database retrieval system