Tachysurus fulvidraco (yellow catfish): 113637610
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Entry
113637610 CDS
T08119
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113637610 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113637610 (exosc8)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113637610 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113637610
NCBI-ProteinID:
XP_026994145
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All DBs
Position
20:complement(7650119..7659219)
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AA seq
284 aa
AA seq
DB search
MPKSRKGFHSVQRTAEPQEYHRSFLKEKCRPDGRELGEFRPTTLNVGSIKTADGSALVKI
GNTTVICGIKAELAVPTADAPEKGFIVPNVDLPPLCSSRFRPGPPGEQAQVASQFIADII
DDTNIIKKEELCIEKSKLCWVLYCDIMCLDYDGNLLDACIITLLAALKNAQLPKVTINKE
TDLPEVDMQHKTHLQINKHPVASSFAVFDDEVIIVDPTTEEESLATALITAVTDEDDQLC
AFHKPGGSSLLAEKLQDCVSRAVARNREINKLIDKVTESIKSSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaatccaggaaaggctttcacagtgtgcagaggacagcggagccacaggaatac
cacagaagctttttgaaagaaaaatgccggccagacgggagagagctgggagagtttaga
cctacaacgctaaacgttggatcaataaaaacagcagatggctcagcattggtgaagatt
ggaaacaccactgtcatctgtggtataaaagcagaacttgctgtgcccactgctgatgct
cctgaaaaggggtttattgttccaaatgtggatctgcctcccctgtgctcgtccagattt
cggcccggtcctccaggagaacaggctcaggttgccagccagttcatcgctgatatcatc
gatgacactaacattataaagaaagaagaattgtgcattgagaagtcaaagttgtgctgg
gtcctgtactgtgatatcatgtgtttagactatgatggaaatttactagatgcctgcatc
ataactttactggcagcattaaagaatgcacagcttcctaaagtcacaatcaacaaagag
actgatttacctgaggttgatatgcagcacaagacacatctgcagattaacaagcaccct
gttgcctcgtcattcgcagtatttgatgatgaagtgattatagtggacccaacaacagaa
gaggaaagtttggctacagcattaataactgcagtcacggatgaggatgatcagctttgt
gctttccataaaccagggggcagttccttattagcagagaagctgcaggactgtgtaagt
cgagctgtggcccgaaatcgagagatcaacaaactcattgacaaagtcaccgagagcata
aagtcatcaaaataa
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