Tachysurus fulvidraco (yellow catfish): 113637872
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Entry
113637872 CDS
T08119
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113637872 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfd01007
]
113637872 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113637872 (farsb)
Enzymes [BR:
tfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
113637872 (farsb)
Amino acid related enzymes [BR:
tfd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
113637872 (farsb)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113637872 (farsb)
Prokaryotic type
113637872 (farsb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
113637872
NCBI-ProteinID:
XP_026994587
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All DBs
Position
11:1894017..1901638
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFQALGKTYTDEEFDELCFEFGLELDEITSEKDIISREQGDQKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKEKTEAPRYRRVSPANGDPQRLVITEETASVRP
HAVAAVLRNITFTSERYDSFIELQEKLHQNICRKRTLVAIGTHDLDTISGPFTYTAKAPE
EIRFRPLSQSQEYTATQLMSLYKTDSHLRHYLHIIEDEPLYPVIHDSNGVVLSMPPIING
DHSKISVNTKNVFIECTATDVTKAKIVLDMMVTMFSEYCDEPFTVEEVEVKYPDGRKFSY
PELAYRSETLSADFINRRVGINETADSIAHLLTRMCLRSEVTGEADQIQVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTVANQLPLNKLTELLRTDLAAAGFTEALTFALCS
REDIADKLGKKITETRAVHIANPKTAEFQVARTTLLPGLLKTVAANRKMALPLKLFEISD
VVLKDKRKDVGARNNRRLCAVYYNKSPGFEVIHGLLDRLMQLLDVKPSRSHGYHIQASED
STFFPGRCAEIFFGGKSIGRLGVLHPDVINAFDLTMPCSALDVDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgttaaacgggatcttctcttccaagctttggggaagacgtacact
gatgaagaatttgacgagctctgctttgagttcggccttgagctggacgagattacatcg
gagaaggacataataagtcgcgagcagggcgatcagaaagccgaaggagcctcagatgtg
gtcctctataagatcgatgtcccggccaacagatacgacctgctgtgtctggagggactc
gttcgaggactgcaggtcttcaaggagaaaacggaggctccgcgttacaggcgtgtgagt
ccagcgaacggagacccacagaggctcgtcatcactgaggagacagcgagtgtgaggcca
catgcggtggctgctgtgctgcggaacatcacgttcacgtcggagcgctatgacagcttc
atcgagctgcaggagaaactgcaccagaacatctgcaggaaaaggacgctggttgccata
ggaacccacgacctggacaccatctcaggaccgttcacgtacacggctaaagcgccggag
gaaatccgcttcaggccgctcagtcagagtcaggaatacacggccacccagctcatgagc
ctctacaagacggacagccacctgagacattatctgcacatcattgaggacgagccactt
tacccagtcatacacgacagcaatggagtcgtcctctccatgccacccatcatcaatggt
gatcacagcaaaatttctgtcaacaccaagaacgtttttatcgagtgcacagccaccgac
gtcactaaggcgaagatagtattggacatgatggtgaccatgttcagcgaatactgcgac
gagcctttcacggttgaggaggtggaggtgaagtatcctgatggcaggaagttctcctat
cctgagctggcctataggtcggaaacgctttcggcagacttcatcaaccgcagagtcggc
atcaatgagacagctgacagcatcgcacatctcctcacccggatgtgtttgaggtcagag
gtcacgggcgaagcagatcagattcaagtggaaatcccgccgactcgctctgatgtcatc
cacgcctgtgacatcatggaagacgctgctatggcgtacggtttcaacaacatccccagg
acaacacctcgcacctacacagtagccaatcagctccctctaaacaagctgactgaactg
ttgaggacagatctggcagcagcaggattcactgaagctctaacttttgccctgtgttct
cgagaggacatcgcagacaaactgggaaagaagattacagagaccagagctgttcacatc
gccaaccctaaaaccgctgagttccaggtggcaagaactacactgctgcctggtcttctg
aagactgtggctgcaaacaggaagatggcgctaccgctcaaattgtttgagatttcggat
gtcgttctgaaggacaaacgcaaagacgtgggagcccgtaacaacagacgtctgtgtgcg
gtttactacaacaagtcaccagggtttgaagtcatccacggcctcctggaccgactcatg
cagttgttggatgtcaaaccgagccgcagccatggttaccacatccaggcatccgaagac
tccactttcttcccgggccgctgcgccgaaatcttttttggcgggaaaagcatcgggcgc
ctcggcgtccttcaccccgacgtcataaatgccttcgacctcaccatgccctgctccgcc
ctcgacgtcgacatcgagcccttcctgtga
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