Tachysurus fulvidraco (yellow catfish): 113638498
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Entry
113638498 CDS
T08119
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030
DNA replication
tfd03410
Base excision repair
tfd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113638498 (zgc:110269)
03410 Base excision repair
113638498 (zgc:110269)
03450 Non-homologous end-joining
113638498 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113638498 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113638498 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113638498 (zgc:110269)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
113638498 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
113638498 (zgc:110269)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
113638498 (zgc:110269)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113638498 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
113638498
NCBI-ProteinID:
XP_047662221
LinkDB
All DBs
Position
22:598498..615948
Genome browser
AA seq
344 aa
AA seq
DB search
MGITKLSDLIRADAPDSISYKEIGDYNGKIIALDTSIIVNQFRSAVPNLNLSLLGVFYRT
LTFLEHDIKPVFVFDGDPPEQKRAVLEKRAQNAGWSSAQRSHTLSSKTQEFLRLLQLLGV
PCVQAPGDAEACCAQMVRGGVVDAVASEDMDTLAFGGMVLLRQLNAKKVSEVMEFSLTKL
LETLQLTQKEFVDLCILLGCDYCDKITGLGPSRALKLIQQHRTIEDVMLNINRKTHPVPL
GWQYQAARRLFLDPPQSDPPRLQWSEPNEQELVNFLCQEKHFKEEKVRGRMEKFRKNLEH
RRKEREEKMRGGRQTSLNEFFRLTRKRRSAGTGQSTVTKKSNVI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcacgaaattatcggatttaattcgtgctgacgctccagactcgatatcttac
aaagagatcggagattacaatggaaaaataatcgcacttgacacgtccattattgtgaat
cagttccgttcagctgttcctaatctgaatttaagcttgttaggtgtcttctaccgcact
ctgaccttcctggagcacgacatcaagccagtgtttgtgtttgatggagatcctcctgag
cagaagagagctgtgctggagaaaagagcgcagaatgcaggctggagcagtgcgcagcgt
tctcacaccttgtcctctaaaacccaggagttcctgcgtctcctccagctcctgggtgtt
ccttgtgtccaggctcctggtgatgctgaggcatgttgtgctcagatggtgagaggtgga
gtggtggacgccgtggcttcagaggacatggacacgctggcgtttggagggatggttctc
ctccgtcagctcaatgcgaagaaagtgagtgaggtgatggagttctctctgacaaagtta
ctggaaaccctacagctgacacagaaagagtttgtggatctgtgtattttactaggatgt
gattattgtgataagatcacaggtttggggccgagtcgagcgctgaagctcatccagcag
caccgcactatagaggatgtgatgctcaacatcaacaggaagacacacccagtcccttta
ggctggcagtaccaggctgctcggaggttgttcctggacccgccccagtctgatcctcca
cgtctacagtggagtgagccgaacgagcaggagctggtaaacttcctgtgtcaggagaaa
catttcaaggaggagaaggttcgagggcggatggagaagtttcggaagaatctcgaacac
aggaggaaagagagagaggagaaaatgaggggaggcagacagacgagtctgaatgaattc
tttcgcctaactcggaaaagacggtctgcaggaacaggccaatccacagtcacaaagaaa
tccaacgtgatctga
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